Bradyrhizobium arachidis: WN72_11945
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Entry
WN72_11945 CDS
T06898
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
barh
Bradyrhizobium arachidis
Pathway
barh00521
Streptomycin biosynthesis
barh00523
Polyketide sugar unit biosynthesis
barh00525
Acarbose and validamycin biosynthesis
barh00541
O-Antigen nucleotide sugar biosynthesis
barh01100
Metabolic pathways
barh01110
Biosynthesis of secondary metabolites
barh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
barh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
WN72_11945 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
WN72_11945 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
WN72_11945 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
WN72_11945 (rfbB)
00525 Acarbose and validamycin biosynthesis
WN72_11945 (rfbB)
Enzymes [BR:
barh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
WN72_11945 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
QOZ66946
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Position
complement(2495814..2496920)
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AA seq
368 aa
AA seq
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MELFVAKDSTLASQCDPKRFLVTGGAGFIGSAVVRRLIETTSSDVLVVDKLTYAGNLDSL
RPVSANPRYRFEQADIADAAAMRRIVTAFAPDVVMHLAAESHVDRSIDGPGEFIQTNVVG
TFALLQAALEYWRKLPSQRKDGFRFHHISTDEVFGSLGATGYFSEETAYQPNSPYSASKA
ASDHLVRAWHHTYGLPVVITNCSNNYGPYHFPEKLIPLTIINALEGKPLPVYGKGENIRD
WLHVDDHAEALLLVAHKGVTGQCYNIGGHNEATNIDVVRAICALVDELAPNPSIGPRERL
ITFVADRPGHDARYAIDAAKIARELGWKPRHSFESGLRQTVQWYLDNKTWWERVRTGTYR
GERLGLAV
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggaactgttcgtggctaaggactcgacgttggcttcgcaatgcgatccgaagaggttt
ctcgtaaccggcggagcaggcttcatcggctcggccgtcgtgcgtcgcctcatcgagacc
acgtcgagtgacgtcctcgtcgtcgacaagctcacctacgcgggcaatctggattcgctt
cggccggtttccgcgaatccgcggtaccgcttcgagcaagctgacatcgccgatgctgcg
gccatgcgacgaattgtgacggcgttcgcaccggacgttgtcatgcatcttgcggctgaa
agtcacgtcgaccgctcgatcgacgggcccggtgagttcattcaaaccaatgtcgtcggc
acctttgcactgcttcaggcggccctggagtactggcggaagctgccgtcgcaacgcaag
gacggctttcgcttccatcacatctcgaccgacgaggtttttggatcgctgggagccacc
ggctacttcagcgaagagacggcctatcagcccaactccccctattccgcgtccaaggcc
gcatccgatcacctagttcgcgcctggcaccatacctacggcctgccagtcgtgatcacc
aactgctccaacaattacggcccctaccactttcccgaaaagctgattccgctgacgatc
atcaatgcactggagggcaagccgctcccggtctacggcaagggtgaaaacatccgcgac
tggcttcatgtggatgaccacgcggaagcactcctgcttgttgctcacaaaggcgtcacg
ggacagtgctacaatatcggcggtcacaatgaggccacaaatatcgatgttgtcagggcg
atctgcgcattggtcgatgagctcgcccccaatccgtcgatcggcccacgcgaacggctg
atcacctttgtggcggaccgcccgggccacgatgcacgctatgcgatcgacgctgcgaag
atagcgcgagagctgggctggaaaccaaggcacagttttgagagcggattgcgccaaacc
gtgcaatggtatctcgacaacaagacatggtgggaacgcgtgaggacaggcacctatcga
ggcgagcgacttggcctcgcagtctag
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