KEGG   Bradyrhizobium arachidis: WN72_30095
Entry
WN72_30095        CDS       T06898                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
barh  Bradyrhizobium arachidis
Pathway
barh03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:barh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    WN72_30095 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:barh03021]
    WN72_30095 (rpoB)
   03400 DNA repair and recombination proteins [BR:barh03400]
    WN72_30095 (rpoB)
Enzymes [BR:barh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     WN72_30095 (rpoB)
Transcription machinery [BR:barh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     WN72_30095 (rpoB)
DNA repair and recombination proteins [BR:barh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      WN72_30095 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 Biotin_lipoyl_2
Other DBs
NCBI-ProteinID: QOZ70088
LinkDB
Position
complement(6301290..6305408)
AA seq 1372 aa
MAQQTFTGRKRVRKFFGHIKEVAEMPNLIEVQKASYDQFLMVDEPTGGRLDEGLQAVFRS
VFPISDFSGTSMLEFVRYEFEQPKYDVDECRQRGMTFAAPLKVTLRLIVFDIDEETGAKS
VKDIKEQDVYMGDIPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFA
ARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLMFALGLDGEAILSTFYKKILYKRT
KEGWRVPFDANRFRGYSTVNDLIDADTGKVVLEAGKKLTVRAARQLQEKGLKALRMADEE
LVGNYVAEDLVNPKTGEIHAEAGEEITDKLMKALNEQGYKELPLLDIDHVNVGPYIRNTL
SADKNMTREDALFDIYRVMRPGEPPTLESAQAMFQSLFFDAERYDLSAVGRVKMNMRLDL
DAPDTQRTLRKEDILSVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRM
ERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPY
RKVKDGRVTDEVVYLSAMEEGRYTVAQANVPLDPKGRFTEDLVVCRHAGEVLPVTPDKVD
YMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARD
SGAAIAARRSGVIDQIDATRVVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPLVK
VGDIVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKEDVFTSIH
IEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPKGE
SPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIEREE
IERLAKDRDDEQAILDRNVYNRLAELLEGRQGIAGPKGFKKDTKITRAVLEEYPKSQWWL
FASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRK
IQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGW
ACAGLGKRIGQTVDAYLSKQDIKPLKETLKKVYGEDETIKTLNDNELLELGHNLSRGVPI
ATPVFDGAKEADIEEMLKLAGLDASGQSTVYDGRTGDAFDRKVTVGYIYMLKLHHLVDDK
IHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRT
KVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKMGPAPTSEAAE
NT seq 4119 nt   +upstreamnt  +downstreamnt
atggcgcagcagacattcaccggtcgcaaacgcgttcgcaagttcttcggacacatcaag
gaagtcgccgagatgccgaacctcatcgaggttcagaaggcgtcctatgaccagttcctg
atggtcgatgaacccactggcggccgcctcgacgagggtctgcaggcggtgttccgctcg
gtgttcccgatctccgacttctcgggcacctcgatgctggaattcgtccgctacgagttc
gagcagccgaaatacgacgtcgacgagtgccgccagcgcggcatgaccttcgcggctccc
ctcaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggaaaccggtgcgaagtcg
gtcaaggacatcaaggagcaggacgtctacatgggcgatatcccgctcatgacgatgaac
ggcaccttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgttcgccc
ggcgtgttcttcgaccacgacaagggcaagacccattcctcgggcaagctgctgttcgcc
gcccgcgtgatcccgtatcgcggctcctggctcgacatcgagttcgacgccaaggacatc
gtctatgcgcgtatcgaccgtcgccgcaagattccggtgacgtcgctgatgttcgccctc
ggcctcgacggcgaagcgatcctgtccacgttctacaagaagatcctctacaagcggacc
aaggaaggctggcgcgttccgttcgacgccaaccgtttccgcggctactcgaccgtcaac
gacctgatcgacgccgacaccggcaaggtcgtgctcgaggccggcaagaagctcaccgtc
cgtgccgcccgccagctccaggagaaggggctaaaggcgctgcgcatggcggatgaggaa
ctggtcggcaactacgtcgccgaggacctcgtcaacccgaagacgggtgagatccacgcc
gaagccggtgaggaaatcaccgacaagctgatgaaggcgctcaacgagcagggctacaag
gagctgccgctgctcgacatcgaccacgtcaatgtcggcccctacatccgcaacacgctc
tcggccgacaagaacatgacgcgcgaggacgcgctgttcgacatctaccgcgtgatgcgt
ccgggcgagccgccgacgctggaatcggcgcaggccatgttccagtcgctgttcttcgac
gccgagcgttacgacctttccgcggtcggccgcgtcaagatgaacatgcgcctcgacctc
gatgcgcccgacacccagcgcacgctgcgcaaggaagacatcctctcggtcatcaagact
ctggtggacctgcgcgacggcaagggcgagatcgacgacatcgaccatctcggcaaccgc
cgtgtgcgctcggtcggcgagctcatggagaaccaataccgcatcggcctcctgcgtatg
gagcgcgcgatcaaggagcgcatgtcctcggtcgacatcgacacggtcatgccgcaggac
ctgatcaacgcgaagcccgcggctgccgccgtgcgcgagttcttcggctcttcgcagctc
tcgcagttcatggaccagaccaacccgctctcggagatcacccacaagcgtcgtctctcg
gcgcttggaccgggcggtctgacccgcgagcgcgccggcttcgaagtccgcgacgtgcat
ccgacccattacggccgtatctgcccgatcgagacgccggaaggtccgaacatcggcctg
atcaactcgctcgcgaccttcgcgcgcgtgaacaagtacggcttcgtggaaacgccttac
cgcaaggtcaaggacggccgcgtcaccgacgaggtcgtgtacctctcggcgatggaagag
ggccgctacacggtcgcgcaggcgaacgtgccgctcgacccgaagggccgcttcaccgaa
gacctcgtggtctgccgtcacgccggcgaagttctgccggtgacgccggacaaggtcgac
tacatggacgtgtcgccgaagcagctcgtctcggtcgccgcggcgctgatcccgttccta
gagaacgacgacgccaaccgcgcgctgatgggctcgaacatgcagcgccaggcggtgccg
ctggttcgcgccgaggcgccgttcgtcggcaccggcatggaaggcgtcgttgcccgtgac
tcgggtgccgcgatcgcggcgcgccgttccggcgtgatcgaccagatcgacgcgacccgc
gtcgtcatccgcgccacggaagatctcgatccgaccaagtcgggcgtcgatatctaccgc
ctgatgaagtaccagcgctccaaccagtcgacctgcatcaaccagcgtccgctggtgaag
gtcggcgacatcgtcaagaagggcgacatcatcgccgacggtccgtcgaccgatctcggc
gagctcgcgctcggccggaacgtgctcgtcgcgttcatgccgtggaacggctacaacttc
gaagactcgatcctgctctccgagcggatcgtgaaggaagacgtcttcacctcgatccac
atcgaggagttcgaggtgatggcccgcgacaccaagctcggacctgaggaaatcacccgc
gacattccgaacgtctcggaagaagcgctgaagaacctcgacgaagccggtatcgtctac
atcggcgcggaagtgcgtgccggcgacatcctggtcggcaagatcacgccgaagggcgaa
agcccgatgacgccggaagagaagctcctgcgcgccatcttcggcgagaaggcctccgac
gttcgcgacacctcgctgcgcgttcctccgggcgtgcagggcacgatcgtggaagtgcgc
gtgttcaaccgtcacggcgtcgacaaggacgagcgtgcgctggcgatcgagcgggaagag
atcgagcgtctggccaaggaccgcgacgacgagcaggcgatcctggaccgcaacgtctac
aaccgtcttgccgagctcctcgaggggcggcagggcattgccggtccgaagggcttcaag
aaggacaccaagatcacccgtgcggtgctcgaggagtacccgaagtcgcagtggtggctg
ttcgcttcgccgaacgacaagctgatggccgagatcgaggccatgcggaagcagtacgac
gagtcgaagaaggggcttgaacagcgcttcctcgacaaggtcgagaagctccagcgcggc
gacgaattgccgcccggcgtgatgaagatggtcaaggtcttcgtcgcggtgaagcgcaag
atccagcccggcgacaagatggccggccgccacggcaacaagggcgtggtgtcgaagatc
gtgccgatcgaggacatgccgttcctcgaagacggtacgcacgccgacatcgtgctcaac
ccgctgggcgtgccctcgcgcatgaacgtcggacagatcctcgagacccatctcggctgg
gcctgcgccggcctcggcaagcgtatcggccagacggtcgatgcctatttgtcgaagcag
gacatcaagccgctgaaggaaaccttgaagaaggtctacggcgaggacgagaccatcaag
acgctcaacgacaacgagctgcttgagctcggccataacctcagccgcggcgtgccgatc
gcaacaccggtgttcgacggcgccaaggaagccgacatcgaggagatgctgaagctggcc
ggtctggacgcttcgggccagtcgaccgtctatgacggccgcaccggcgatgccttcgat
cgcaaggtgacggtgggctacatctacatgctcaagctgcaccatctggtcgacgacaag
atccatgcgcgttcgatcggtccgtactcgctcgtcacccagcagccgctgggcggcaag
gcgcagttcggtggccagcgcttcggcgaaatggaggtgtgggcgctcgaggcttacggc
gcggcgtacacgctccaggagatgctgacggtgaagtcggacgacgtcgccggacgcacc
aaggtgtacgaggcgatcgtgcgcggcgacgacacgttcgaggccggtattccggaatcg
ttcaacgtgctggtcaaggaaatgcgctcgctcggcctcaacgtcgacctgcacaactcc
aagatgggaccggcgccgacgtcggaagcggccgagtaa

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