KEGG   Babylonia areolata (ivory shell): 143293469
Entry
143293469         CDS       T11321                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
barl  Babylonia areolata (ivory shell)
Pathway
barl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:barl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143293469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:barl03041]
    143293469
   03036 Chromosome and associated proteins [BR:barl03036]
    143293469
Spliceosome [BR:barl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    143293469
 Complex B
    143293469
 Complex C
   U2 SnRNP specific factors
    143293469
Chromosome and associated proteins [BR:barl03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    143293469
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N TPR_DNAAF5 HEAT_MROH2B_C HEAT_ECM29 HEAT HEAT_GCN1 HEAT_2 Htt_N-HEAT_1 TPR_IPO5 XMAP215_CLASP_TOG VPS15-like_hel UNC45-central
Other DBs
NCBI-GeneID: 143293469
NCBI-ProteinID: XP_076460472
LinkDB
Position
19:13912716..13937060
AA seq 1345 aa
MAAASHEAIEEQVRNLQAKRQGLTAGPQQDEEERVGLGTAGHYDQDIYGNGGISMDSRFV
GYDTSIAVTDEPDDEEDTSTVLGKKSTYTAPLNLLHETANDKDYDPLAEHRIPKISDRED
EYRARRRTMIISPERYDPFAEGGKTPDPKLAARTYVDIMHERALNQEQVGLRQQMQEKAK
AGDLHVVSGSGAADSQKAAGKRRRWDQTADTGAPAAKKKSSWDAAETAAPTPSNSRWDET
PGRPKGSDTPGATPSTRQWDATPGHATPGATTPGRDNTPGHPASSARKNRWDETPKADRE
TPGHGAGWAETPRTDRGGGDLIQDTPTPGASKRRSRWDETPGGATPSGLTPSFTPGGLTP
SGMTPSGMTPSGMTPSGAMTPSGMTPSGMTPSGVTPVGQKAMAMATPTPGHLMSMTPEQL
QAYTWQREIDERNRPLSDDDLDTMFPPGYKVLQPPAGYVPIRTPARKLIATPTPLVGVGG
TPTGFRMQTPDHKTGVVDMQPKGNLPMMKPDDMQYFDKLLVEVDEETLSPEEQKERKIMK
LLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRI
LYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDN
MDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQISILMGCAI
LPHLKNLVEIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRQHR
GKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATD
GVEPQYIKDEILPPFFKHFWNQRMALDRRNYRQLVDTTVEIANKVGAAEIVSRVVDDLKD
EAEQYRKMVMETIEKIMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTVVN
ALGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAIVMKTCQEEKLMGHLGVVLY
EYLGEEYPEVLGSILGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLV
GRIADRGAEFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLN
NLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFMFEYIG
EMGKDYIYPVTPLLEDALMDRDLVHRQTAMAAIQHMALGVAGFGCEDALIHLLNYVWPNV
FESSPHVVQAFMGAIEGLRVAVGPSKILQYTLQGLFHPARKVRDVYWKVYNTVYIGAQDG
MIPSFPRVPNDTKNQYIRYELDYML
NT seq 4038 nt   +upstreamnt  +downstreamnt
atggcggccgcttcacatgaggcaatcgaagagcaggtccggaacctgcaggcaaagcga
caggggctgactgctggcccacagcaagatgaagaggagagggtggggcttggaactgct
ggccattatgaccaagacatttatggcaatggtggaatcagcatggacagccgctttgtt
ggctatgacacctccattgctgtcacagatgaacctgatgatgaagaagacaccagcaca
gtcttgggaaagaagtccacttacactgctccattgaatttgctgcacgagactgccaat
gacaaggattatgatcctctggcagaacacaggatcccaaagatttcagacagggaggat
gagtatcgggcacggaggagaaccatgatcatttccccagaacgatatgacccctttgct
gaaggtggtaagactcctgatcccaaactggccgcccgtacctatgtggacatcatgcac
gagagagccctaaaccaagagcaggtaggactgcggcagcagatgcaggagaaggccaag
gccggggacctgcacgtggtcagcggctcaggggcagcagactcacagaaggcagcgggc
aagcgacggcgctgggatcagactgcagacactggagcaccggctgcgaagaaaaaatcg
tcctgggatgccgccgaaacggcagcccctaccccatccaacagtcgctgggatgaaact
cctggccgtcccaaagggagtgacaccccgggagctacgccatccacccggcagtgggac
gccacacctggccatgccacacctggagctaccacacctggccgagacaacacacctggt
cacccggccagcagcgccagaaagaacagatgggacgagacacctaaagcggacagagaa
acaccaggccatggggctggctgggcagaaacacctcgcacagaccgtggaggtggtgac
ctcattcaggacacacccaccccaggggccagcaagaggcgctcacgttgggacgaaacc
ccaggtggagccaccccgagtgggctcaccccaagtttcacacctggtgggctgaccccg
tctggtatgacaccctccggcatgacccccagtgggatgaccccaagtggagctatgaca
ccttctgggatgaccccgtctgggatgacccccagtggggtgacccctgttggccagaag
gccatggccatggccacacccacaccaggtcatctgatgtccatgactccagaacagcta
caagcgtacacgtggcagagggagattgacgagaggaaccgccctctgagtgacgacgac
ctggacaccatgttccccccagggtacaaggtgctgcaacccccagcaggttatgtacct
atccgcaccccagcccgtaaactgatcgccacacccacacctctggttggggtgggaggt
acccccacaggcttccgtatgcagacgccagaccataagacaggggtggtggacatgcag
cccaaagggaacctgcccatgatgaagccagatgacatgcagtactttgacaaactgctg
gtggaggttgatgaggaaaccctgtcgccagaggaacagaaggaaaggaagatcatgaag
ctgttgctgaagatcaagaacggaacaccacccatgagaaaggctgcactgaggcaaatc
acagacaaggcccgtgagtttggggccggacctctgttcaaccagatcctgcctctgctc
atgtccccaactctggaggaccaggagcgtcacctgctggtgaaggtcatcgaccgcatc
ctgtacaagcttgatgaccttgtgagaccttacgtgcacaagatcctggtggtgattgag
cccctgctgatcgatgaggactactacgcccgtgtggagggcagagaaatcatctccaac
ttggccaaggctgctggcctggccaccatgatttctaccatgcgtcctgatatcgacaac
atggatgagtatgtgcgtaacaccaccgctcgagcctttgccgtggtggcctcggcgctg
ggtattccgtctcttctgcccttcttgaaggccgtgtgcaagagcaagaagtcatggcaa
gctcgtcacacaggcatcaaaattgtgcagcaaatctccatcctgatgggctgtgctatc
ctgccccacctgaagaacttggtggagatcattgagcatgggttggtggatgaacagcag
aaggttcgaaccatcactgccctggccctggctgccctggctgaagcagcaaccccgtac
ggtatcgagtcctttgatagtgttctgaagcctctttggaagggtatccgtcagcacaga
ggaaagggtcttgctgccttcttgaaggccattggttacctcatcccgctcatggacgct
gagtatgccaactactacacccgtgaagtgatgttgatcctcattcgagagttccagtct
cctgacgaggaaatgaagaagattgtgctgaaggtggtgaagcaatgctgtgccacggat
ggtgtggaaccacagtacatcaaggatgaaatcctgcctcccttcttcaagcacttctgg
aaccagcgcatggcccttgacagacgcaactacagacagctggtagatacgactgtggag
attgccaacaaggtgggagcagcagagatcgtgtcacgtgtggtggatgatctgaaagat
gaagctgagcagtaccgtaagatggtgatggagaccattgagaagatcatgtccaacctg
ggggctgctgacattgactcccgactggaggagcagttgattgacggcattctgtatgcc
ttccaggaacagaccacagaggatgtggtgatgctgaatggttttggcacggtggtgaac
gccctgggaaagagagtgaagccctacctgcctcagatctgtggtaccatcctgtggcga
ctcaacaacaagtctgccaaagtgcgacagcaggcagccgacctcatctctcgcatcgct
attgtcatgaagacctgtcaggaggagaaactgatgggtcacttgggcgtggtgttgtat
gagtacctgggagaggaataccctgaagtgctgggttccattcttggagctctcaagtcc
atcgtcaacgtcatcggcatgaccaagatgactcctcccatcaaggatctcctgcctcgc
ctcacccctatcctcaagaacagacatgagaaagtgcaggagaactgcattgacctggtt
ggacgcattgctgaccgaggagcagagtttgtgtctgcccgagagtggatgagaatctgt
tttgagttgctggaactgctgaaggctcacaagaaggcaattcgtcgtgcgactgtcaac
acctttggctacattgcaaaggctatcggtccccatgatgtgttggccaccctgctgaac
aacctgaaggttcaggagcgccagaaccgtgtgtgcaccactgtggccatcgccattgtg
gcagagacctgttctcccttcaccgtgctgcccgccctgatgaatgagtaccgtgtgcca
gagctgaatgtccagaatggggtgctcaagtcactctccttcatgtttgagtacatcggg
gagatgggcaaggactacatctaccctgtcacacccctgttggaagatgctctcatggac
agagacctggtccatcgacagacggccatggcggccatccagcacatggccttgggggtg
gccgggtttggctgcgaggacgccttgatccacctgctgaactacgtgtggcccaacgtg
tttgagagctccccccatgtggtgcaagctttcatgggggccattgagggattgagggtg
gcggttgggccctccaaaatcctccagtacacactgcagggtctgttccatccagcccgc
aaagtgcgtgacgtgtactggaaggtgtacaacacagtgtacatcggtgcccaggatggc
atgattccctcctttcctcgcgtccccaacgacaccaagaaccagtacatccgctacgag
ctggactacatgttatag

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