Babylonia areolata (ivory shell): 143295446
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Entry
143295446 CDS
T11321
Name
(RefSeq) nucleoporin NDC1-like
KO
K14315
nucleoporin NDC1
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143295446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barl03019
]
143295446
Messenger RNA biogenesis [BR:
barl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
143295446
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
143295446
NCBI-ProteinID:
XP_076463263
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Position
20:34011556..34037874
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AA seq
576 aa
AA seq
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MDSVTYWYKSEVHFWRTSGSLFWSVSCFPPVTVLFVLLSQISLLQPWMGLTDFLSVTCTF
SFVLWLCVLVAVLVAVACTTTFTVVPDVPSTRLESYLSLLRLSRLPHMAVSTLGGACVAW
CLSHLVGERFYGLTALVTTAGREVLVLNESHLFYVLAGSLAGLVYYCNFYLNHRNYLVFP
ALQRDKYFRVRNDVVQMAKQCLHLVRRHLQILIVGYWTLGFTYRSWVMGALSVDAIRDQP
LNRVSILVDVGLLWQTALCSFFIVFTWGLMAVLYRVYHTQRLEIPVLSTFGADSKHSLTE
ALNSQSADILQYLAFLDLSHLSRCSPQRRQEMFSLSQPGGHPHTWRGVCGTCLQQLEGLA
AQVNAAHQSALAALPVHSLPADKIFSFAGETPLTQRGLSHSFAQSPGVENLPLHPPAPPA
APPANKQSLASMVYSGLKTKPILSYFLMELPDSKSRQLFASCQVHIWAIEAISELAAASY
EEDKYGVVQMTLSAIFTTLVSLHDNLEKYFKLQPTALRRGGKDSQPPPHVILCQQLREGL
KTAIYRLTNRFGKHLGDFHLKVDCSKRLRPFLDFKE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtaacttattggtataaatcagaggtacacttttggcggacgtcaggaagc
ctgttttggagtgtatcatgctttccaccagtcactgttctctttgtgctcttgagccag
atcagcttgctgcagccatggatgggtcttacagattttttgtctgtgacctgcaccttt
tcctttgtgctgtggctttgtgtactggtggctgttctggttgctgtggcctgtactaca
actttcacagtggttcctgatgttccatcaacacgactggaaagttatctgagcctgtta
cgcctgtcccgtctcccgcacatggcagtgtccactctgggcggagcgtgtgtggcgtgg
tgcctgtctcacctagtgggtgagcgcttctacgggctgaccgcgcttgtgaccacagct
ggcagggaagtgctggtgctgaacgagtctcacctgttctatgtactggcagggagcttg
gctgggctggtctactactgtaacttttacctgaaccaccgcaactacctggtatttcct
gcacttcagagagacaaatatttccgtgtgcgaaacgatgttgtccagatggccaagcag
tgtcttcatcttgtgaggagacaccttcagatattgatcgttggttactggaccttgggt
ttcacctacagaagctgggtgatgggtgctctcagtgtggatgccattcgtgaccagccc
ctgaacagggtgtccatactggtggacgtgggactgctgtggcagacggctctctgctcc
ttcttcatcgtcttcacctgggggctgatggccgtgctctacagggtctatcacacacag
cgtctggagattccagtactgtcaacgtttggtgccgactccaaacacagtttgactgaa
gctctaaactctcagtctgcagacatactgcagtacctggcatttctggacctgtcccac
ctgtcacgctgcagcccccagcgtcgccaagagatgttcagcctgagtcagccaggaggt
cacccgcacacctggcgcggagtgtgtggcacctgtctccaacagctggagggtctagcg
gcacaggtgaatgcagctcaccagtcagctctggccgccttacctgtgcacagtctgccc
gctgacaaaatcttttcctttgctggtgagacacctttgactcagaggggattgtcacac
tccttcgcgcaatcccctggtgtggagaatctcccactacatcctcctgctcctcctgct
gcccctcctgccaacaaacagtctttggcttcaatggtgtactctggcctgaaaactaaa
cccatcctgagctacttcctgatggagctgcctgattccaagagtagacaactctttgcc
agctgtcaggtccacatctgggccatcgaggcaatctcagagttggcagcagcatcgtac
gaggaagacaagtatggtgtggttcagatgacactctccgctatcttcaccacactggtg
tctctgcatgataacttggagaagtatttcaagctccagccgacagccctacggcggggc
ggcaaagactcgcagcctcccccacatgtcattctgtgtcagcagctgcgggagggcctc
aagacagccatctaccgcctcaccaacagattcggcaaacatctcggagacttccaccta
aaagtggattgctccaagagattacgacctttcctggatttcaaagaatga
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