Babylonia areolata (ivory shell): 143300662
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Entry
143300662 CDS
T11321
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143300662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barl03019
]
143300662
Messenger RNA biogenesis [BR:
barl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143300662
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
143300662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
NOT1_connector
ARM_Cnot1
CNOT1_HEAT
DUF3819
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
143300662
NCBI-ProteinID:
XP_076470609
LinkDB
All DBs
Position
26:complement(9857586..9928162)
Genome browser
AA seq
2496 aa
AA seq
DB search
MNLDSLSFALAEISFSVANLTKKNYKSSVTGINQLVAKHGAEADRHLFRCLLSHIDFSGD
GKSSGKDLYQIQYLTVDNGHFLGRPNFVSILCYAVDNPLHHQKTLKPSAQLLPQLSKVLK
LNRVQEVVYAFALLNSSKPDTVQYATQFLRQKIPDLIHSYVDDGRQEGGLQDAGVEALHL
LLSNLLRGRDAYGIGRDQKEALLKSLRRDFPRERVPAILSFLLYPDIEDIPVTQLIELKN
MPSTMMDSSLAELVIEAGYACTSSKEECRSVMLGVRDLTPLAVARALGMMARTVISLGDQ
APQSNTGWPEKADTPGVTTWNVENFIQVIRDLAPSLDWKEVVGQLDHPGFLINSKKGLRL
LTDGLMRGLQLSNHNFPIQLLFRPWNNTEGQLSLILHSLRSHDVFCFADYLPASDLVVCD
ILKSAPSDDDREVSTWKSLNLVETLLRLSEAGHYQPVSDAFKFPMNKCPDVLVLALLQTT
PTWNTLKQELISSLIAVFLNSHPNSAAILHYAWHNQSHSGTIRTLIMHSMAKWYMQGEVH
DQMRLTRILDCAQDLKALSMLLNATPYAFVVDLACLAARREYLKLDKWLSDKIAEHKEPF
ISACVTFLKRRCPQLMGGKDEQPLNKPQTLMPEAITTMLQCLKQVAGHVNPELQEAINTL
CSNATMFLSKLRGAPTAGPPGGPKPPSYPQGMMDQMGMGPVMGQQQPPVVGPVGGGGAPG
PPGPPGGGGFPQTMPPLNPATPGSPARAFPGIGGQPSSANPGFNPMSTLNSQFQNMGFQN
TPGINTPRQSINTLASLSMSVAARPPAPSDQRLSSRTGGAPGAAGPGPGGGGTGPGPGPG
GGANSGPHGDINSLFPEMQQTFSKDVEDQANSYFQQIYNQPPQSNMTIDQVLAMLKRFKD
SNQKMEKDVFQCMLRNLFEEYRFFPQYPDRELQTTAVLFGGIIDQGIVTYWTLGIALRYI
LEGLRKPHGSKMYMFGITALDRFKSRLKEYPQYCQHLAAIPHFREFPQHIIEYVDYGARS
QEPPQSHADTGHMGVGPPPINPARSTPMDVGMGPGGIPTSMGGNSSMPASNPVHPPPTQA
PPPPSSATSQPPPPPAPTASTGAASAGSSQSGGGRGPTFPKPSIATATNIDTLLAGQGKE
EISVPPESLQDKVFFIFNNLSLANMNQKGEELKEHVGDEYIPWVSQYLVMKRASIEPNFH
VLYSNFIDVLKIMQLSNMVLKETYRNIKVLLQSDIKGVANFSDRSLLKNLGHWLGMMTLG
KNKPILRSDMDLKSLVYEAYHKGAQELLYVVPFTAKVLESCAKSKVFKAPSPWTMAIMNV
LAELHQEQELKLNLKFEIEVLCKTLGLDVKDLVPGNYLKDPNRMVLLEVQYLSKPQIAAP
PPKEPEEPTIVPPPPPNIGLPYPVNQHFFQVPVSLPPPVPMPPLPANMQTSMPPPPMQPP
GLVFDNISTNPNNFQQQLTFNEKHPFLIAHPMLIPIIRTTVERTINELIGPVVDRSIKIA
LTTCEQIVKKDFALEPDENRMRNAAHCMMRNITCGLALITAREPVLGQITSNLKTAFTNK
LGPNLPAHKDVVDQVSSTLANEMVDICTAFIQKTAVERAGPETDKRLAAEFDLRKAARNE
NRRYCDPACLTYQAERMPDQIRLKVGSVTSQQLAVYEEFARHLPGFMPAPMEFMQNLQKS
MLAPPPPQQPPQPPMMPQMPPQPPPNVPPPPPPQYGQDEVTLIYDRIVRDLEQHLQVVPV
VPQNPMTVQLHSLLDTAITTRNLREPRHSAVLLQKAVEGLLEHYIPSSITSDQQELLLRF
RECHLMVLKGLADSRALGPGWAPKEITRCLIVMGREESKYNLEAVETLMRSGLMNTSQFD
VYLSSLLDNASSSTISFVMQVMARICADDKNSPHSFSEGDFPQTVECLNTLARQSRQSPE
GLENLMTNLRMPPADNSAMAMASSGPGNASTMMQSGITQAREFDDPPGLHEKTEYLLREW
VNMYHSPAAGRDSTKAFTHFVQQQMHQQGILKTDDLITRFFRLCTEMCVDLCYRALGEQS
HSPTLVRAKCFHTLDAFVRLIALLVKHSGDNSNTVTKINLLNKVLGIVAGVLLQDHEVRY
TEFQQLPYHRIFIMLFIELNAPEPILEGINYQVLAAFCQVFHILRPTKAPAFAFAWMELI
SHRVFIGRLLALTPGQRGWGMYAQLMMGLFKFLAPFLRNAELSKSTQLLYKGTLRVLLVL
LHDFPEFLCDYHYTFCDVIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDSLPDIAQAP
RILSNYVSIIHPASFRKDLDSYLKTRSPITFLSDLKSNLQSTEAGSHYNIPLVNALVLYV
GTQAIQHVNSKGQTPSMNTIAPSPHMDIFQNLAVNLDTEGRYLFLTAISNQLRYPNSHTH
YFSCCLLYLFAQAHNEAVKEQITRVLLERLIVNRPHPWGLLITFIELIKNPSFKFWQHDF
VHCAPEIEKLFESVARSCTLKTPTNTMRETETTEVH
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagattcgctttcctttgctctggcagagataagtttttcagtggccaatctc
accaagaaaaactacaaatcaagcgtcactggaataaatcagctggttgccaagcacggg
gctgaagcagacaggcatctctttcggtgccttttgtctcatatagatttcagcggggat
ggtaaaagttctggcaaagacttgtaccagatccagtatttaactgttgacaacggccat
ttcctgggaaggccgaactttgtctccatcctttgctacgctgttgacaacccactacac
catcaaaagactctgaagccttcagcccagctgctgccgcaactgagcaaagtgttgaag
ctgaaccgcgtgcaagaagtggtttatgcttttgctctgctcaactcttcaaaacctgac
actgtgcagtacgccacccagttcctcagacagaaaatcccagacttgattcactcctac
gttgatgacggacggcaagagggagggttgcaggacgcaggtgtagaagctctgcacctt
ctcctctctaacttgcttcgaggacgcgacgcttacggaattggcagagatcagaaagag
gctctgctcaaatcccttcgacgagatttcccacgagaacgagtgcctgccattttgagc
ttcctgctgtacccggatatcgaagacattcctgtgacccaactgattgagctgaagaac
atgccttcaaccatgatggactcctctctggctgaactggtgattgaagctggatatgcc
tgcacctccagcaaggaagaatgtcgcagtgtgatgctgggcgttcgggacctgacgcca
ctggctgtggcacgggctctgggcatgatggcgcgcaccgtgattagccttggagatcaa
gcaccacagtctaacactggttggccggaaaaagcagacacaccaggtgtgacaacatgg
aatgtagaaaacttcattcaagtgattcgcgacctggccccgtccttggactggaaggag
gtggttggacagctggatcaccctggctttctcatcaactcaaagaaaggcctgcgcctg
ctgacagatggcttgatgcgagggctccagctcagcaaccacaactttcccatccagctt
ctcttccgcccctggaacaacacagagggacagctgtcactcattcttcattcactgcgc
agtcatgatgtcttctgctttgccgactacctgcctgcatcggatttggtggtttgtgat
attctcaagtcagcccctagcgatgatgatcgtgaagtgtcaacctggaaaagcctgaac
ctggtggagacattgctgaggctgtcagaagctggccactaccagccggtgtctgatgcc
ttcaagttccccatgaacaagtgcccggatgttctggtcttggccctgcttcagaccacg
ccaacatggaatacgctgaagcaggaactgatctccagtctgatcgcagtgttcctcaac
agtcatcccaactcggctgccatcctgcactatgcttggcacaaccagagtcactcgggt
accattcgcaccctgatcatgcattccatggcgaagtggtacatgcaaggagaggttcat
gaccaaatgagactgacacgtattctggactgtgcacaggacctcaaggctctgtccatg
ctgttgaacgcaactccgtatgcctttgtggttgacctggcttgcttggctgcacggagg
gagtacctcaaactggacaagtggttgtctgacaaaatagctgaacacaaggaacctttc
atctctgcctgcgtgacatttctgaagcggaggtgtccgcagctgatgggtgggaaggac
gaacagccactgaacaagccacagactctgatgcccgaagctatcaccaccatgctgcag
tgcctcaaacaagtggccggtcatgtgaacccagagttgcaggaggccatcaacacactg
tgctcaaacgccacgatgttcctgagcaagctgcgaggggcccccaccgccggcccccct
ggaggccccaagcccccctcctacccacagggcatgatggaccagatgggcatgggacct
gtcatgggacagcagcagccacctgtcgtgggacctgtgggaggagggggggctccgggc
ccacctggccccccaggaggcgggggtttcccgcagaccatgcccccactgaaccccgcc
acaccaggctccccagcccgggccttcccaggcattggtggtcagcccagcagtgccaac
cctggcttcaaccccatgtctacgctcaactcacagttccagaacatgggattccaaaac
acacctggaattaacactccccgtcagtccatcaacactctggcgtctctcagcatgtct
gtagctgcccgcccccctgctcccagtgaccagcgcctcagcagcaggacaggtggggct
ccaggtgcagcaggtcctggccctggtgggggtggcacaggtccgggcccaggtccagga
ggaggggccaacagcggccctcacggagacatcaacagcctcttccctgaaatgcaacaa
acattcagcaaagatgtggaggaccaggcaaacagctacttccagcaaatctacaaccag
cccccacagtccaacatgaccattgaccaggtccttgccatgctcaagaggttcaaggac
tctaaccagaagatggagaaggatgtgtttcagtgcatgctgcggaatctgtttgaggaa
taccgattcttcccacagtaccctgacagagagctccagaccacagctgttttgtttggt
ggcattattgaccaaggcattgtcacgtactggacactaggcattgcactgcgttacatc
ctcgagggtctgcggaagcctcatggcagcaaaatgtacatgtttggtatcacagccctg
gacaggttcaaaagcagactgaaggaatacccacagtactgtcagcatctggctgccatc
ccacacttcagagaatttccacaacacatcattgagtatgtggactacggggcgcgttcc
caggagcccccacagtcgcatgcagacacgggtcacatgggtgtggggccaccccccatc
aacccggcacgaagcacccccatggacgtcggcatgggccctgggggcatacccactagc
atggggggtaactccagcatgcccgcctccaaccctgtccaccctccccccacccaggcc
ccccctcccccttcctccgcaacctcccagcccccgcccccacctgcgccgaccgcctcc
actggggctgcctctgccgggtccagccagtccggagggggcagggggcccacatttccg
aagccttctattgccacagccaccaacatagacaccttgctggctgggcaaggaaaggag
gaaatctcggtgccccctgagtcccttcaggacaaagtcttcttcattttcaacaacctg
tctctagccaacatgaaccagaagggagaggagctgaaggagcatgtgggagacgagtac
atcccctgggtgtcgcagtacctggtgatgaagagagccagcatcgaacccaacttccat
gtcctctactccaacttcatcgacgtgctcaagatcatgcagctcagcaacatggtgctc
aaggaaacctatcgcaacatcaaggtgttgctgcaaagcgacatcaagggcgtggccaac
ttctctgaccgatctctgctgaagaatctgggtcactggcttggcatgatgaccctgggc
aagaacaaacccatcctgagatctgacatggatctgaagtcgctcgtgtacgaagcgtac
cacaagggagcccaggagctgctgtatgtcgtacctttcactgccaaggtcctggaatcc
tgtgccaagagcaaggtgttcaaggcacccagcccgtggaccatggccatcatgaatgtg
ctggcagagctgcatcaggagcaggagctgaagctgaacctcaagtttgagattgaggtt
ctctgcaagaccctgggcctggatgtcaaagacctggtgccgggcaactacctgaaggac
cctaatcgcatggttcttctcgaagtgcagtacctgtccaagcctcagatcgctgctcca
ccccctaaggaaccagaggagcccaccattgtccctccaccccctcccaacattggcctc
ccttaccctgtcaatcagcatttttttcaggtgccggtgtccctccccccgccagtgccg
atgccgccactgcctgctaacatgcagacgtccatgcccccaccacccatgcagcccccg
ggcctggtgttcgacaacatcagcaccaatcccaacaacttccagcaacagctcaccttc
aacgaaaagcatcccttccttattgctcacccgatgctgattcccatcatcagaacgaca
gtggagcggaccatcaacgagttgatcgggcccgttgtggatcgctctattaagatcgcc
ctgactacctgcgagcagatcgtcaagaaagactttgccttggagccagacgagaaccgg
atgcgcaatgcagcgcactgcatgatgcgcaacatcacctgtggcctggcgcttataact
gcgcgagaaccagtcctaggacagataaccagcaacctgaaaactgccttcaccaacaaa
ctggggcccaacctgcctgcccacaaagatgtggtggatcaggtgtcctccaccctggcc
aatgagatggtggacatatgcactgccttcatccagaaaacagcagtggagagagcaggg
cccgaaaccgacaaaagactggcagctgaatttgatcttcgtaaagcagctcgcaacgag
aaccgaagatactgcgacccagcatgcctcacttaccaagctgagaggatgcctgaccag
atccgtctgaaggtgggttcggtgaccagccagcagcttgcagtgtatgaggagtttgca
cgacacctgcccggctttatgcccgctcccatggagttcatgcagaacctgcagaagtcc
atgctggccccaccaccgccacaacagccgccgcaacctcccatgatgccgcagatgcct
ccacagcctcctcccaacgtgccgccgccacccccgccacagtacgggcaggatgaggtg
acccttatttacgaccgcatcgtgcgagacctggaacaacacctgcaggtggtgcctgtg
gtgccccagaaccccatgactgtgcagctccactccctgctagacaccgccatcaccacc
cgcaatctccgggaaccgcgccattctgccgtgctcctgcagaaggcggtggaagggttg
ctggagcactatatcccttccagcatcacctcagaccagcaggagctgctcctgcgcttc
cgtgaatgccacctcatggtcctcaagggacttgctgactctcgcgctctgggccctggc
tgggctcccaaagagatcacacgatgcctgatagtgatggggcgagaggagtccaagtac
aaccttgaggctgtggagaccctgatgcgcagtgggctgatgaacaccagccagtttgac
gtctacctatccagcctcttggacaacgcctcctcttctaccatctcctttgtcatgcaa
gtcatggcccgtatctgtgctgatgacaagaacagtcctcacagcttctccgagggtgac
ttcccacagactgtggaatgcctcaacacactggcgcgacagtccagacagtcccctgaa
ggactggagaacctgatgaccaacctgcgcatgccaccagccgataattcggccatggcc
atggccagtagcggccctggcaatgcctccaccatgatgcagtctggcatcacgcaggcg
cgggagtttgacgacccgcctggtctgcacgagaagacagagtacctgctgcgtgagtgg
gtcaacatgtaccactccccagccgctgggagggacagcaccaaggccttcacccacttt
gttcaacagcagatgcatcagcaaggcatcctgaagacggacgacctgatcacccgcttc
ttccgcctgtgcacggagatgtgtgtggacctgtgctatcgggctctgggggagcagtcc
cactcacccaccctggtgcgggccaagtgcttccacacactggacgcctttgtacggctg
atcgcactgctggtgaaacactccggggacaacagcaacactgtgaccaagatcaacctg
ctcaacaaagtccttggtatcgtagccggtgtgctacttcaagaccatgaagttcgctac
acagagttccagcagcttccataccatcgcatcttcatcatgctcttcattgagttgaat
gccccagaacccatcctggaaggcatcaactaccaagtcctggcagctttctgccaagtg
ttccacatcctgagaccaacaaaagcaccagcctttgcctttgcctggatggagctgatc
tcacaccgtgtcttcattggtcgtctcctcgctttgacccccgggcagagggggtggggg
atgtacgcccagctgatgatgggccttttcaagttcttggctcccttcctgcgcaacgca
gagctcagcaagtccacacagctgctgtacaagggcacgctgcgtgtacttcttgtgctg
ctgcacgacttccccgagttcctgtgtgactaccactacacattctgtgacgtaatccca
cccaactgcatccagatgcgtaacctgatcctgagcgccttcccccgcaacatgcgtctg
cccgaccccttcacccccaacctgaaggtggacagtctgccagacattgcccaggctccc
aggattctcagcaactatgtcagcatcatccatcctgcttctttcaggaaggacctggat
tcatacttgaagacccggtcccccatcaccttcctttcagatctcaagagtaacttgcag
tcgacagaggcggggagccactacaacatcccactggtgaatgctttggtgctgtacgtg
ggcacgcaggccatccagcatgtcaactccaaggggcagacccccagtatgaacactatc
gccccctcgcctcacatggacatcttccagaacctggctgtcaaccttgacactgagggt
cgctacctgttcctgacggccatctcaaaccagctgaggtaccccaacagtcacacacac
tatttcagctgctgtctgctctacctgttcgcacaggcccacaatgaggctgtcaaagag
cagattacccgggtgctgttggagaggctgattgtcaacaggcctcacccatggggtctt
ctaatcaccttcattgagttgatcaagaacccatccttcaagttctggcagcatgacttc
gtgcactgcgctcctgaaattgaaaagctattcgagagcgtggccagatcatgcacgctg
aaaacgccaaccaacaccatgcgagaaacggagacaactgaagtccactaa
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integrated database retrieval system
