KEGG   Bartonella sp. JB15: BJB15x_007480
Entry
BJB15x_007480     CDS       T05113                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
bart  Bartonella sp. JB15
Pathway
bart03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bart00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BJB15x_007480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bart03021]
    BJB15x_007480
   03400 DNA repair and recombination proteins [BR:bart03400]
    BJB15x_007480
Enzymes [BR:bart01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BJB15x_007480
Transcription machinery [BR:bart03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BJB15x_007480
DNA repair and recombination proteins [BR:bart03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BJB15x_007480
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AQX28146
LinkDB
Position
complement(827994..832142)
AA seq 1382 aa
MAQTLAMMSQFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMIEEPEGGRLDEGLQ
AVFKSVFPISDFSGTAMLEFVRYEFDSPKFDVEECRQRDLTYAAPLKVILRLIVFDIDED
TGSKDIKDIKEQGVYMGDMPLMTNNGTFVINGTERVIVSQMHRSPGVFFDHDKGKTHSSG
KFLFAARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLMALGMDASDILSTFYNKV
TYECAKNGWRIPYSVDRFKGMKLASDLVDADSGEVVAEAGKKLTVRAARLLEEKGLKAIE
VSEDDLLGSYLAEDIVNYQTGEIYLKAGDEIDEKALKILSDVGADQINILDIDHMNVGAY
IRNTLKMDKNESRQDALFDIYRVMRPGEPPTINTAEAMFHSLFFDLERYDLSAVGRVKMN
LRMGLDCPDTVRILRQEDIIAVVKMLVELRDGRGEIDDIDNLGNRRVRSVGELMENQYRI
GLLRMERAIKERMSLVEIDTIMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITH
KRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGF
IESPYRKIVDGRVTKEVVYLSAMEESKHYVAQANSSLDVEGRFTEEFVVCRHAGEVLMAP
RDHIDLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPLVGTGMEA
IVACDSGAAIGAKRGGIVDQVDAMRIVIRATEDLDPSKSGVDIYRLQKFQRSNQSTCINQ
RPLVHVGDRIEKGDIIADGSSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDV
FTSIHIEEFEVAARDTKLGPEEITRDIPNVAEEALRNLDEAGIVYIGAEVHPGDILVGKI
TPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMA
IEREEIERLAKDRDDEQSILDRSVYARLADILTGKIVIEGPKGFSKGETLDSTIMEQYPR
YQWWQFAVEDEKLQSEIEALHKQYDESKKALQCRFMDKVEKVQRGDEMPPGVMKIVKVFV
AVKRKIQPGDKMAGRHGNKGVVSRILPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILE
THLGWACAGMGKKIGDLVKLYQESGDILPLRQRIENLIPDDDRNEPVRQYDDESLLKLAH
QMKKGVSIATPVFDGAHEADINMMLEDAGLDSSGQVTLYDGRTGEPFDRPVTVGYIYMLK
LHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVK
SDDVAGRTKVYEAVVRGDDTFETGIPESFNVLVKEMRSLGLNVELDDARELIAQQTLTNS
ED
NT seq 4149 nt   +upstreamnt  +downstreamnt
atggctcagactttagcgatgatgtctcaatttaatggtcgtagacgtgtgcgcaagttt
tttggtaagattcctgaagtagcagaaatgccaaatcttattgaagttcagaaagcttca
tatgatcaatttcttatgattgaggaacctgaaggcgggcgtttagatgaaggtttgcag
gctgtttttaaatcggtatttcctatttcagatttttctggtacagctatgcttgaattt
gttcgttacgaatttgattcacctaaatttgatgtggaagaatgtcgtcagcgtgatttg
acatacgcagcaccattaaaggtgatattgcgtttaattgtctttgatattgatgaagat
actggttcaaaagatattaaggacattaaagaacaaggtgtttatatgggtgatatgccg
ttaatgacaaacaatggtacgtttgtcattaatggtacagaacgtgttattgtttcgcag
atgcatcgctctccgggtgtattttttgatcatgataaaggaaaaactcattcgtcaggt
aagtttctttttgcagctcgtgtgataccttatcgtggttcttggcttgatattgagttt
gatgctaaagatattgtctatgcccgtattgataggcgacgcaagattccagtaaccagc
cttttaatggcgttgggtatggatgcttcagatattttatcaacattttataataaagtt
acttatgaatgcgctaagaatggctggcgtattccctattcagttgatcgttttaaaggc
atgaaactagcttctgatcttgttgatgcggatagcggtgaagttgttgcagaggctggt
aaaaagttaacggttcgtgctgcaaggcttttagaagaaaaaggtctaaaagcgattgaa
gttagtgaagatgatttgttgggatcctatcttgcagaagatatcgtgaattatcaaaca
ggtgagatttatcttaaagctggtgatgaaattgacgaaaaagcattaaagattttatct
gatgttggtgctgatcaaattaatattcttgatattgaccatatgaatgttggtgcatac
attcgtaatacattgaagatggataaaaatgaaagtcgacaggatgctttatttgatatt
tatcgagtaatgcgtccaggtgaacctccgacaattaatacagcggaggctatgttccat
tcattgttttttgatctagagcgttatgatctttcagctgttgggcgtgtcaagatgaat
ttgcgtatgggtcttgattgtccggatacggttcgcattttgcgtcaagaagatattatt
gctgttgttaaaatgttagttgaattgcgtgatggtcgtggtgaaattgatgatattgat
aatcttggcaatcgtcgtgtgcggtcagttggcgaattgatggaaaatcaataccggatt
ggtttgcttcgtatggagcgtgcaataaaagaacgtatgtccttagttgaaattgataca
attatgccacaagatttgattaatgcaaagccagctgcagctgcagtccgcgagtttttt
ggatcttcacaattgtcgcaatttatggatcaaaccaatccattgtcagagattacccat
aagcgtcgtctttctgcccttggtccaggtggtttaactcgtgagcgtgcaggttttgaa
gtgcgtgatgtacatcctacgcattatggtcgtatttgtccgattgaaacaccggaagga
ccaaatattggtctgattaattctttagcgacatttgctcgggttaataaatatggtttc
attgaaagtccatatcgcaaaatcgttgatggtagggtgacgaaagaagtcgtttatctt
tctgctatggaggaatcgaaacattatgtagctcaggctaactcttcgttagatgtagaa
ggacgttttacagaagaatttgttgtttgtcgtcatgctggtgaagttttaatggcgcca
cgtgatcatatagatttgatggatgtttcaccaaaacagttggtttctgtagctgctgca
cttattccgtttttggaaaatgatgatgcaaaccgcgctctgatgggctccaatatgcaa
cgtcaagcagttccgcttttacgtgcagaagcgccgcttgttggtacaggtatggaagca
atagttgcttgtgattcaggtgctgctattggtgcgaaacggggtggtattgttgatcaa
gttgatgcaatgcgtatcgttattcgtgcgacagaggatttagatccttcaaaatctggt
gttgatatctaccgtttacagaaatttcagcgttccaatcaatctacctgtattaatcag
cgtcctctcgtacatgtaggagatcggatagaaaaaggtgatattattgctgatggttca
tctacagatcttggtgatttagctcttggaagaaatgttcttgtggcatttatgccttgg
aatggttacaattatgaggattctattttactttctgagcgtattgttgctgatgatgta
tttacttcgatacatattgaagagtttgaggttgctgcacgtgatacaaagcttgggcca
gaagaaatcacccgagatattcctaatgttgcagaagaagcattaagaaatcttgatgaa
gctggtattgtctatattggtgctgaggttcatcctggtgatattttagttggtaagatt
acgccaaaaggtgaaagtccaatgacgcctgaagaaaagcttttacgtgcaatttttggt
gaaaaagcttcggatgttcgtgatacttctatgcgaatgcctcctggaacttttggtact
gttgtagaagttcgtgtttttaatcgtcatggtgtagaaaaagatgaacgtgcaatggca
attgaacgtgaagaaattgaacgtttagctaaagatcgtgatgatgagcaatcaattctg
gatcggagtgtttatgcacgtcttgcggatatattaacaggtaaaattgtgatagaaggt
ccaaaaggtttttccaaaggagagactcttgatagtacaataatggagcaatatccacgg
tatcagtggtggcaattcgctgttgaggatgagaagcttcagagtgaaattgaagctttg
cataagcagtatgatgagtcaaaaaaagcactacaatgtcgctttatggataaggttgag
aaagtccaaagaggtgatgaaatgcctcctggtgttatgaagattgtgaaggtttttgtt
gcagtgaagcggaaaatccaaccaggagataaaatggcagggcgtcacggtaataaaggt
gttgtgtcacgtattcttccagtagaggatatgccgtttcttgaagatggaacgcatgcg
gatattgtcttaaatcctttgggtgtgcctagtcgtatgaatgttggtcaaattcttgaa
acacaccttggttgggcgtgtgcaggcatgggtaagaaaattggtgatttagtaaagctt
tatcaagaaagcggagatatattgcctttgcgtcagcgtattgaaaatcttattcctgat
gatgatcgcaatgaaccagttcgccaatatgatgatgaaagtcttttaaagttggcacat
caaatgaaaaaaggtgtttcaattgcgacacctgtttttgatggagctcatgaagccgat
atcaatatgatgttggaagatgcaggcttagatagttcagggcaagttacactttatgat
ggtcgtactggagagccttttgatcgtccagtgactgtagggtatatctatatgcttaaa
ttgcatcatcttgtggatgataagatacatgcacgttcaattggaccttattcacttgtt
acgcagcaaccattagggggtaaagctcaatttggtggtcagcgttttggtgaaatggaa
gtttgggcacttgaagcatatggtgctgcatatactttgcaggagatgttgacggttaaa
tcagatgacgtggcaggtcgaacgaaggtttatgaagcagttgttcgtggtgatgataca
tttgagacaggtatccctgagagctttaatgtcttggttaaagaaatgcgttctcttggt
cttaatgtagagcttgatgatgcacgtgaacttattgcgcaacaaacattgactaattca
gaagattaa

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