Bifidobacterium asteroides: BAST_1454
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Entry
BAST_1454 CDS
T02271
Name
(GenBank) ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bast
Bifidobacterium asteroides
Pathway
bast03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bast00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAST_1454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bast03019
]
BAST_1454
03009 Ribosome biogenesis [BR:
bast03009
]
BAST_1454
Enzymes [BR:
bast01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BAST_1454
Messenger RNA biogenesis [BR:
bast03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BAST_1454
Ribosome biogenesis [BR:
bast03009
]
Prokaryotic type
rRNA processing factors
BAST_1454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AFU72023
LinkDB
All DBs
Position
complement(1852549..1855218)
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AA seq
889 aa
AA seq
DB search
MPEKTNNEDTQDSRSASGNGQERQVQETAGSGTRRRAGRRVVRVAGAAGADVPVKVEAEK
RKTSRRAKEEDDESEPSSTRRRRTRKSKEDQTADQSVQDHSGQDAQDDGSESKPTRTTTR
RRTRTATRRRTEEHAQEGEPDQDRQERALEAVEALTSGRSQRTGRKAQEQDERPRASRPR
PMTSLLFQEPVIPASRPEQDERQERDDEDEEVEQSSKTSRRGRSRNASEGGSRRSRRLNA
EERRAADEVERIEEDLDHEGITFVVDDDQEQDEDQQESGTRTRRRRRAKSDDEDTEKTVS
TRRRRRGHEQEKDKDDEDEAPLTRRRRRRRGSKSAEGEPEESSTRRSRKQQYIDEITDVE
GSTRLEAKKQRRRDNRRERSRQSQLVEQDFLARRENVNRLMVVREKEHHTQISVIEDDIL
VEHYVSDIQEVSTVGNIYLGRVQNVLPSMEAAFVDIGQARNGVLYAGEVNWDSTRLEGQP
RRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTLAGRFLVLVPSGGMTGVSRKLPDRER
SRLKSIVSRVAPKDMGVIIRTAAEGASEEALTKDLENLQRQWSKIEDKRKEFLHGKRPKL
LQGEPDVAIRVVRDIFNDDFAKLVVQGEGVYERVRNYLETMAPDLEEKLEHWDPAEHQGK
DVFDRWSIDSQLRKGMERQVYLPSGGSLVIDRTEAMTTIDVNTGRFIGKGKSLEETVTRC
NLEASEEIARQLRLRDIGGMIMIDYVDMVMPANRDLVLRRLVECLARDRTKHQVAEVTSL
GLVQMTRKRVGQGLVEAFSEECPTCHGRGFILHDKPTISASYADPYAVKGGDPFVKTNKH
GHGSSAKETLSTGSTPAVKAKLARIAAAAQAASDEDEAQAETADVAKES
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaaaaaacgaataatgaggatacccaggatagtaggtccgccagtgggaatggg
caggagcggcaggtccaggagaccgccggttccggtacccgtcgccgtgctggacggcgt
gtggtcagggtggccggcgcagctggtgccgacgtgcccgtgaaagtcgaggccgagaag
cgcaagacctcccgcagggccaaggaggaggacgatgagtccgagccctcctccacccgt
cgccgtcgcacccgcaagtccaaggaggatcagacggccgatcagagcgtgcaggaccac
tccggccaggatgcccaagatgatgggagcgagtccaagccaaccaggacgaccactcgt
cgtcgcaccagaactgccacccgtcgacgcaccgaggagcatgcccaggagggcgaacct
gatcaagaccgtcaggagcgtgcccttgaggctgtggaggctctgacctcaggccgcagc
cagaggaccggccggaaggcccaggagcaggatgagcgtccacgcgcatcccgtccccgt
cctatgacatccctgctcttccaggagccggtcatacccgcctcccggcctgagcaggat
gagcgccaggaacgggatgatgaggacgaggaagtcgagcaatcgtccaagacctcccgt
cgcggcaggtccaggaacgcttcggagggcggctcgcgccgttcccgcaggctcaacgcc
gaggagcgcagggccgccgacgaggtggaacgcatcgaggaggatctggatcacgagggt
atcactttcgtggtcgacgatgatcaggagcaggacgaggatcagcaggaatccggcacc
cgcacccgtcgccgtcgccgtgccaagagcgatgatgaggacactgagaagaccgtttcc
actcgtcgtcgccgtcgcgggcacgagcaggagaaagacaaggatgacgaggacgaggcc
ccgctgacccgtcgtcgtcgccgtcgcaggggctccaagtccgctgagggcgagccagag
gagtccagcacccgccgttcacgcaagcagcagtatattgacgagatcaccgacgtggag
ggctccacccgcctggaggccaagaagcagcgccgacgggacaaccgccgcgagcgctcc
cgccagtcccagctggtcgagcaggacttccttgcccgccgcgaaaacgtcaaccgtctg
atggtggtgcgcgaaaaggagcaccacacccagatctcggtcatcgaggacgacatcctg
gtcgagcactacgtctccgacatccaggaggtctccactgtcggcaacatctacctgggc
cgggtccaaaacgtccttcccagcatggaggccgcattcgtggacataggccaggcccgc
aacggtgtgctctacgccggcgaggtcaactgggactccacccgtctggagggccagcca
cgccggatcgaactggccttcaaatccggcgatcccgtgctggtccaggtcaccaaggat
cccatcggccacaagggcgcccgcctgacctcgcaggtcacgctggccggccgtttcctg
gtcctggtcccctcgggcggcatgaccggcgtcagccgcaagctgcccgaccgcgagcgt
tcccgcctcaagagcatcgtctccagggtggctcccaaggacatgggggtcatcatccgc
accgcggccgagggggccagcgaagaggccctgaccaaggacctggagaacctgcagcgt
cagtggagcaagatcgaggacaagcgcaaggagttcctgcacggcaagcgtcccaagctt
ctgcagggcgagccggacgtggccatccgcgtggtccgcgacatcttcaatgacgacttc
gccaagctggtggtccagggcgagggggtctacgagagggtccgcaattacctggagacc
atggcccccgacctggaggagaagcttgagcattgggatccggccgagcaccagggcaag
gacgtcttcgaccgttggagcatcgacagccagctgcgcaagggcatggagcgtcaggtc
tacctgccatccggcggctccctggtcatcgaccgcaccgaggccatgaccaccatcgat
gtgaacaccggccgcttcataggcaagggcaagtccctggaggagacggtgacccgttgc
aacctggaggcctccgaggagatcgcccggcagttgcgtctgcgcgacatcggcggcatg
atcatgatcgactatgtggatatggtcatgccggccaaccgcgacctggtcctgcgccgt
ctggtggagtgcctggcccgggaccgcaccaagcatcaggtggccgaggtcacctccctg
ggtctggtccagatgacccgcaagcgggtgggccaggggctggtcgaggccttctccgag
gagtgccccacctgccatggccgaggcttcatcctccacgacaagccgaccatctccgcc
tcctatgccgacccctatgcggtcaagggcggcgaccccttcgtcaagaccaacaagcat
ggtcatggctcctctgccaaggagaccctgtccaccggctcgacgcctgcagtcaaggcc
aagctggccaggatcgctgcggcggcccaggcggcatcggatgaggatgaagcccaggct
gagacggcggatgtcgccaaggagtcataa
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