Bacillus amyloliquefaciens TA208: BAMTA208_20650
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Entry
BAMTA208_20650 CDS
T01824
Symbol
trmF
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
baz
Bacillus amyloliquefaciens TA208
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
baz03016
]
BAMTA208_20650 (trmF)
03036 Chromosome and associated proteins [BR:
baz03036
]
BAMTA208_20650 (trmF)
Transfer RNA biogenesis [BR:
baz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BAMTA208_20650 (trmF)
Prokaryotic type
BAMTA208_20650 (trmF)
Chromosome and associated proteins [BR:
baz03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
BAMTA208_20650 (trmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_binding_2
Pyr_redox_2
FAD_oxidored
DAO
HI0933_like
Pyr_redox_3
AlaDh_PNT_C
Thi4
Motif
Other DBs
NCBI-ProteinID:
AEB26276
LinkDB
All DBs
Position
complement(3931544..3933430)
Genome browser
AA seq
628 aa
AA seq
DB search
MGYEAGQYDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIV
VREIDALGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKHTLEKTPNLT
LLQGIAERLIIEDGECRGVITQTGAEYKAKTVVLTTGTYLRGRIILGDLSYSSGPNNQQP
SIKLSEHLEELGFDLVRFKTGTPPRVSSDSIDYSKTEIQPGDPVPRAFSYETVEYITDQL
PCWLTYTSPETHEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPE
GRNTQEVYVQGLSTSLPEDVQQRMLATIPGLEKVQMMRAGYAIEYDAIVPTQLWPTLETK
KIPNLYTAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTK
GTNEPYRLLTSRAEYRLLLRHDNADLRLTEIGHEIGLISDERYEAFEKKKAAIEAEKKRL
WSVIIKPSPENQEYIRSLGGSELKDGVRGTDLMKRPEMNYETVTKLAPADSPVPQDVAEQ
VEIQVKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKEVRPLSVAQA
SRISGVNPADISILLVYLEQGRIAKVAE
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggggtatgaagcaggccaatacgacgtgattgtcatcggcgccgggcatgccggtgtt
gaggctgcgctcgcatccgcgcgccagggagctaaaacgcttgttttgacgattaatctt
gatatggttgcgtttatgccatgtaatccgtctgtcggcggccccgcgaaagggattgtc
gtccgcgaaattgacgcgctcggcggagaaatggcaagaaatatagataaaactcatatt
caaatgagaatgctgaatacaggaaaaggtccggccgtacgggcgctgcgagcgcaggcg
gataaattccaatatcagcatgaaatgaagcatacgctggaaaaaacaccgaatttgaca
cttcttcaagggattgccgagcgtttaatcattgaagacggcgagtgccgcggtgtcatt
acgcaaaccggtgctgaatataaggcgaaaacggtcgtactgacaacggggacgtattta
agagggcggatcattcttggtgatctgtcttactcaagcggtccgaataaccagcagccg
tctattaaactttctgagcacttagaggagctcggttttgatctcgttcgttttaaaacg
ggaacccctcctcgcgtatcaagcgattccattgattacagcaaaacagaaatccagccg
ggggacccggttccgcgcgctttctcatatgaaacggttgaatacattaccgatcagctg
ccttgctggctgacttacacgagtcctgagactcatgagatcatcgacagcaatctgcat
cgttcgccaatgtattccggtatgattaaaggaacggggccgagatattgcccttctatt
gaagataaagtcgttcggtttaatgataaaccgcgtcatcagattttccttgagccggaa
ggcaggaatacgcaggaagtatacgttcaaggtttatccacgagccttcctgaggacgta
cagcagcggatgctggcgaccattccgggactggaaaaggtgcaaatgatgagagccgga
tatgcgattgagtatgacgcgatcgtaccgacgcagctctggcctacactggagacgaaa
aaaattcctaacctgtatacggccggtcaaattaacggtacatcaggttatgaagaagca
gccggacaaggaattatggcgggaatcaacgcaggccgcaaagcgcttggaaaagaagag
gtgatcctcagccgttccgatgcgtatatcggtgtattgatcgatgatttggtaacgaaa
ggaaccaatgaaccataccgtctgctgacttcacgcgcggaatacagactgctgctccgc
catgataatgcggatcttcgtctgacggaaatcggccatgaaatcggcttaatttctgat
gagcgctatgaagcgtttgaaaagaaaaaagcggcgattgaggctgagaaaaaacgtctc
tggtctgttattatcaagccgtctcctgaaaatcaggaatatatccgttcactcggcgga
agcgagctgaaagacggagtgcgcggcacagatttaatgaaacgtccggaaatgaactat
gaaacagtgacaaaacttgcacctgctgattctccggttccgcaagatgtggcggaacaa
gtggaaattcaggtgaaatatgaaggatatatcgaaaaatccttgcagcaagtggagaag
ctgaagaaaatggaaaacaaaaaaatccctgatcggattgattatgacgccattaaagga
attgcaactgaagcccgccaaaagctgaaagaagtgcgtcctttatcagttgctcaagcg
tcccgtatttccggagtcaatccggcagatatttcaatcctgctggtatacctggagcag
ggccgtattgccaaggtagctgaatag
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