Bdellovibrio bacteriovorus HD100: Bd3500
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Entry
Bd3500 CDS
T00159
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bd3500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bba03400
]
Bd3500
Enzymes [BR:
bba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Bd3500
DNA repair and recombination proteins [BR:
bba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bd3500
Prokaryotic type
Bd3500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
CAE78292
UniProt:
Q6MHP0
LinkDB
All DBs
Position
complement(3409570..3410358)
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AA seq
262 aa
AA seq
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MSGQEDWHRKNNLKSNRFALESRTWTMDLCQIEMENINSEIKLDSSWKQHLHLEFETERM
QKLNKFLSAEYKAGKTIYPHGDDYFAAMNLTPFDKVKVVIVGQDPYHGPGQAHGLCFSVQ
DGVRFPPSLRNIFKELHDDVGATIPQSGSLTKWAQEGVLLLNAVLTVEDGKAAAHQGKGW
EEFTDKIIHVLNEEKENLVFILWGSYAQKKASFVDRKKHLVLEAVHPSPLSAHRGFFGTK
PFSKTNAYLKSKGIGEINWNLV
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgtctggtcaagaagactggcaccgaaaaaataatttgaaatcgaataggtttgcatta
gaatcccgaacctggaccatggacctgtgtcagattgagatggaaaatattaactcagaa
atcaaattagactcatcttggaagcagcatctgcatctcgaatttgaaaccgagcgcatg
cagaagctgaataaatttttatctgctgaatacaaagcgggtaaaacaatttatccccat
ggcgatgactacttcgcggcgatgaatctgactccttttgacaaagtgaaagtggtgatc
gtcgggcaggatccttatcatggccctggtcaggcgcacggactttgtttttctgtgcaa
gacggcgttcgttttcctccgtctcttagaaacatctttaaagagcttcacgacgacgtg
ggcgcgaccattccacaaagtggctccttgaccaagtgggctcaagaaggtgtgttgttg
ctaaatgccgtgctgacagtcgaggacggaaaagccgctgcccatcaaggcaagggctgg
gaagagttcaccgataagatcatccacgtgctgaacgaagaaaaagaaaatcttgtgttc
attctgtggggttcttacgcacagaaaaaagcgtccttcgtggatcgcaaaaaacacctg
gtgcttgaggccgtgcatccatcaccgctgtccgctcaccgcggattctttgggaccaag
cccttctccaaaaccaatgcctatctgaaatccaagggtattggcgaaatcaactggaac
ctggtttaa
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