Bacillaceae bacterium IKA-2: RJD24_04585
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Entry
RJD24_04585 CDS
T10990
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
bbam Bacillaceae bacterium IKA-2
Pathway
bbam00190
Oxidative phosphorylation
bbam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbam00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
RJD24_04585
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RJD24_04585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbam03019
]
RJD24_04585
Enzymes [BR:
bbam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
RJD24_04585
Messenger RNA biogenesis [BR:
bbam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RJD24_04585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
SHCBP_N
Motif
Other DBs
NCBI-ProteinID:
WNF37742
LinkDB
All DBs
Position
complement(931457..933565)
Genome browser
AA seq
702 aa
AA seq
DB search
MQKSANPTNNYIDLNNPNFYNNRELSWLRFNERVLEEAIDERNPLLERLKFLAIFSSNLD
EFFMVRVAGIKDQVKAGYNKPENKAGLTPKEQLARIASFNHRIVTLQDHLYTETLLPMLY
HEGFQFLAIEQCNNEQLHFLKERFSRYIMPVLTPMAIDAYRPFPMLLNKSLNLAVLLSDS
NANKDKLAIVQVPSVLARFIELPSSNNKSQFIFLEDVISHFIHKLFNGFKVLSVSPFRIT
RNADLTIHEEGARDLLREIEKELKKRKSGAAVRLEMQIGRMSEKVLPFLLEVLELKQKDV
YTFNGPLDLTYLFKFYSTISADHDYLVNETLIPQPPEDLANDENIYEAILKNDIFLHHPY
ESFQPIIDFISNAADDPSVLAIKQTLYRVSGDSPIIDALARAAENGKQVTVLVELKARFD
EEKNIQWAKKLEKSGVHVIYGITALKTHSKITLIVRLENNEIQRFVHLGTGNYNDSTAKL
YTDMGLLTCDEKFGIDATNFFNNLSGFSEKPKWHYLSTAPFEIRETFLRLIEEEIQYHKK
NGNGRIIAKMNSLTDKPIIIKLYQASQAGVKIDLIIRGICCLRPKIAGVSDNITVTSIVD
RFLEHSRIFYFQHGDEQAIYLSSADWMTRNMEKRIEILFPIFNEQIKKRVIEILEITLKD
NMKARQQDEDGSYNYVKKAENDVEIQSQMIFYQMAAKFFEDS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaagcgcgaatcccacaaacaactatatcgatctcaataaccctaacttttat
aataaccgagaactaagttggcttagatttaacgaacgagtgctagaagaagcaatcgat
gaacgaaacccccttttagaacggttaaaatttttggctattttcagttccaatttagac
gaattctttatggtaagagttgctggcataaaagaccaagttaaagcaggttataacaaa
cctgaaaataaagccggattaacacctaaagagcaattagcaagaatcgcttcttttaat
catcgtattgttacattacaagaccacttatatactgaaacactcttaccaatgctatac
catgagggctttcaatttttagcaattgaacagtgtaataatgaacaattacatttttta
aaagaacgttttagcaggtatattatgccggtgttaacgccaatggcaatcgatgcttat
cgtccttttccaatgctattaaataaaagtttaaacttagctgtccttttatcggattcc
aatgctaataaagataaactagctatcgttcaagttcccagtgtcttggctcgttttatt
gaacttccttcttccaataataaaagccaatttatatttttagaagatgtgatcagtcat
tttatacataaactctttaatggttttaaagttttatcagtctctcccttccgaattacc
agaaatgccgacttaacaatccatgaggaaggtgcccgtgacttattgcgtgaaattgaa
aaagagttaaaaaagcgtaaatcaggagcggctgttcgtcttgaaatgcaaattggaaga
atgtctgaaaaagtattaccatttttattagaagttttagaattaaaacaaaaagacgtt
tatacttttaatggacctttagatttaacatacttatttaaattttactccactatcagt
gctgatcacgattatttagttaatgagacacttattccacaaccacctgaagatctggct
aatgatgaaaatatttatgaagcaatcttaaaaaatgatatttttctacatcacccgtat
gaatcatttcagccaatcattgattttatttctaatgctgctgatgaccctagtgtgcta
gcgatcaaacaaaccctttatcgagtcagtggtgactcaccaattattgatgctttagca
agagcagctgaaaacgggaagcaggtcactgttcttgttgagcttaaggcccgctttgat
gaagaaaaaaatattcaatgggcaaaaaagttagaaaaatcaggtgttcatgttatctat
ggaattaccgcattaaaaactcatagtaaaataacactcattgtccgacttgaaaataac
gagattcaacgctttgttcatttaggcacaggaaattacaatgattctactgccaaactt
tatacggatatgggtttactaacttgtgatgaaaaatttggtattgatgctacaaatttt
ttcaataacttaagtggctttagtgaaaaaccaaaatggcattatctttctactgcacca
tttgaaataagagaaactttcttaagattaatcgaggaagaaattcaataccataaaaaa
aatgggaacggaagaattattgcgaaaatgaattcccttactgataagccgattattatc
aaactttatcaggcaagccaggctggtgttaaaattgatttgatcattagggggatctgc
tgcttgcgtcctaaaatcgccggagtaagtgacaatattactgtaacgagtattgttgat
cgctttttagaacatagtcgcatcttttatttccaacatggcgatgaacaagcaatttat
ttatcttccgctgactggatgacaagaaatatggaaaaacggattgaaatcctcttccca
atttttaatgagcaaattaaaaaacgtgttatagaaattttagagattactttaaaagat
aatatgaaagcaagacaacaagatgaagatggaagttacaattatgtaaagaaagcggag
aatgatgttgagattcaaagccaaatgattttttatcagatggccgctaagttttttgaa
gatagttaa
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