Bifidobacterium animalis subsp. lactis BB-12: BIF_01164
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Entry
BIF_01164 CDS
T01840
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbb
Bifidobacterium animalis subsp. lactis BB-12
Pathway
bbb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BIF_01164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbb03400
]
BIF_01164
Enzymes [BR:
bbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BIF_01164
DNA repair and recombination proteins [BR:
bbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BIF_01164
Prokaryotic type
BIF_01164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADC85678
LinkDB
All DBs
Position
complement(768965..769684)
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AA seq
239 aa
AA seq
DB search
MTEIKPLEELMDPGWAEALRPVEPQIRHMGRLLRERIGHGEHIAPASRNILRAFTIPFDS
IRVLIVGQDPYPTPGYAVGLSFSVAPNVHPLPKSLVNIFKELEDDLHVPPPCNGDLTPWT
HRGVELLNRCLTVEIGRPNSHQNLGWEPVTDCAVRALNNRVDEHGKPKPLAAILWGRNAQ
TLEPLLTNAAIIKSAHPSPLSASRGFFGSHPFSRANAALKQMGAEPVDWSLPSSDCPAR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaatcaaacctcttgaggaactcatggatccggggtgggccgaggcgctgcgc
ccggtggagccgcaaattcgccatatggggcgtctgttgcgtgaacgtatcgggcatggc
gaacatatcgcccccgccagccggaacatactgcgcgccttcaccattcccttcgactcc
atccgtgtgctcatcgtgggccaagacccctatcccactccaggctacgcagtgggattg
agcttctcggtggcgccaaacgtccacccgctgccgaagagccttgtcaacatattcaaa
gagcttgaagatgatctgcacgtgccgccaccctgcaacggcgacctcactccttggacc
caccggggggtggaattgctcaaccgctgcctcaccgtcgagattggcaggccgaacagc
caccagaacttgggctgggaacctgtgaccgattgcgctgtgcgtgcactcaacaaccgt
gtcgatgagcacggcaagccaaagccgctggcagcgattctctgggggcgtaacgcccag
accttggagccgttgctgacgaatgccgccatcatcaaatccgcacaccccagcccgctg
tcggcatcgcgcggtttcttcggatcacatcccttctcccgcgcgaacgcagcactcaag
cagatgggagccgaaccggtcgactggtcgctgccatcgtccgattgccctgcacggtaa
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