Brevibacillus brevis: BBR47_02110
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Entry
BBR47_02110 CDS
T00879
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bbe
Brevibacillus brevis
Pathway
bbe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBR47_02110 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbe03021
]
BBR47_02110 (rpoB)
03400 DNA repair and recombination proteins [BR:
bbe03400
]
BBR47_02110 (rpoB)
Enzymes [BR:
bbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBR47_02110 (rpoB)
Transcription machinery [BR:
bbe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBR47_02110 (rpoB)
DNA repair and recombination proteins [BR:
bbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBR47_02110 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
BAH41188
UniProt:
C0ZIH0
LinkDB
All DBs
Position
221485..225024
Genome browser
AA seq
1179 aa
AA seq
DB search
MAGKVIQSGRHRQRRTYSRINEVLGLPNLIEIQQKSYQWFLDEGLREMFQDISPIQDFTG
NLVLEFIDYSLGEPKYDVDESKERDVTYAAPLRVKVRLLNKETGEVKEQEVFMGDFPLMT
ETGTFIINGAERVIVSQLVRSPSVYYNTKVDKNGKQTFTATVIPNRGAWLELETDAKDVI
YVRIDRTRKIPVTVLLRALGFGSDIEILNLLGEDEYIKNTLEKDNTDSTEKALIEIYERL
RPGEPPTVENAKSLLISRFFDPKRYDLASVGRYKMNKKLHLKNRLYNQRLAETLIDTTTG
EIFAEAGQMIDRRVLERIVPALEGSIGFIDVRTHGGVLEDEAIHLQSINIFSPIEDGKII
KVIGNGNVDKSFKHITPADIVSAINYFMNLLHSVGSTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDQNQITPQALINIRPVIASLKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSSFARINDYG
FIETPRRKVDPETGFVLTDISYLTADEEDVFNVAQANQPLDEDGRFVNDMVICRRKGEIL
SVPRDKVDFMDVSPKQVVSVATALIPFLENDDANRALMGSNMQRQAVPLLIPQAPFVGTG
MEHKAAQDSGVAIVAKHPGQVERVTAREIWIRRYQEIDGRKVAGDLDKYKMHKFIRSNQG
TCINQRPIVSTGDWIEKGDIVGDGPSTEKGELALGRNVIVAFMTWEGYNYEDAILLSEKL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALKNLDERGIIRVGAEIQDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGSGIIVDVKVFTRENGDEL
PPGVNQLVRVYIAQKRKISVGDKMAGRHGNKGVIARIMAEEDMPFLPDGSPVEIVLNPLG
VPSRMNIGQVLETHLGMAAKLLGIHVATPVFDGARQAEVFETLAEAGLDRDGKTILFDGR
TGEPFDRRVTVGCVYMLKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMD
VKILSGDEQEIEMREMEDEDEGNGEKLNLVLEGGSLNEE
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggtaaagtgattcaaagtggccgacaccgccagcgtcgtacgtattcacgtatt
aacgaagtgctgggccttccaaatctcatcgagattcaacaaaagtcctaccaatggttc
cttgatgaggggctccgtgagatgttccaagacatttcgccaatccaggacttcacaggt
aatctcgtgctggagtttatcgactacagcttgggagagccgaagtacgatgttgacgag
tcgaaagaacgtgacgtcacctatgcggcgcctctgcgtgtgaaggtacgtttgttgaac
aaagagacgggtgaagtgaaggaacaagaagtattcatgggggatttcccgctcatgaca
gaaacgggaaccttcattattaatggtgctgagcgcgtaattgtcagccagcttgttcgt
tcccccagtgtatattacaacaccaaagtggacaaaaacggcaagcagacgtttacagct
acagtaatcccgaaccggggtgcttggctggagctggagaccgatgcgaaggacgttatt
tatgtccgcatcgaccgtacgcgaaaaatcccggtaacggttcttttgcgtgcgttgggc
tttggttccgacattgagattctcaacttgctgggtgaagatgaatacatcaagaacacg
ctggaaaaagacaatacggattctacggaaaaagcgctcatcgaaatctacgagcgtctt
cgtccgggtgagccaccaacagtcgaaaatgcgaagagcctcttgatctctcgtttcttc
gaccctaagcgctatgatttggcttctgttggtcgctataaaatgaacaaaaagcttcat
ttgaaaaaccgtctgtacaaccaacgtctggctgaaacgttgatcgatacgacaacaggt
gaaatttttgccgaagcaggtcaaatgattgaccgtcgtgtgttggaacgtattgtgcca
gctctggaaggcagcatcggatttatcgacgttcgcacgcatggcggcgttctggaagat
gaagcaatccatctacaatctatcaatattttttctccgattgaagatggcaagatcatc
aaagtaatcggaaacggaaatgtagataagtccttcaaacatattacgccggcggacatc
gtatcggcgatcaactatttcatgaacctgctgcacagtgtaggctccacagatgatatc
gaccacttgggtaaccgtcgtctgcgttccgtaggtgaactgttgcagaaccagttccgt
attggtctgtcccgtatggagcgtgtggttcgtgagcgcatgtccatccaggatcaaaac
caaattacaccgcaagctctcattaacatccgtccagtgattgcctcgctgaaggagttc
tttggtagctcgcagttgtcccagttcatggatcaaacaaatccattggctgagctgacg
cacaaacgccgtttgtccgcactcggacctggtggtttgacgcgtgagcgcgcgggcttc
gaagtgcgcgacgttcaccattcccactacggtcgtatgtgtccaattgagacgccagag
ggaccaaacattggtttgatcaactccctgtcgtcctttgcacgcattaacgattacgga
ttcatcgaaacgccgcgtcgtaaagtagatccagaaacaggcttcgtgttgactgatatc
agctacttgactgctgatgaggaagacgtgttcaacgtggcacaggcgaatcagccactt
gatgaagatggccgtttcgtaaacgacatggtaatctgccgtcgtaaaggtgagatcttg
agcgtaccgcgcgacaaggtagacttcatggacgtatcgccgaagcaggttgtatccgtt
gcgacagcgctgattccgttcctcgagaacgatgacgccaaccgcgcactgatgggttca
aacatgcagcggcaggccgttccgcttttgattccacaagcaccgtttgtcggtacgggt
atggaacataaagcagcgcaagactccggggtggcgatcgttgccaagcatccgggtcaa
gttgagcgcgtaacggctcgcgaaatctggattcgtcgttaccaagaaatcgatggcaga
aaagttgctggcgatctcgataaatacaaaatgcacaagtttatccgttccaaccaaggt
acctgcatcaaccagcgtccaattgtaagcactggagactggattgaaaaaggcgatatc
gttggggacggcccatccactgaaaaaggtgaattggctctcggtcgtaacgtaatcgtt
gcgtttatgacgtgggaaggatacaactacgaagacgcgattcttctaagtgaaaaactt
gtaaaagatgacgtgtatacgtctattcatattgaagaatacgagtccgaagctcgcgac
accaagctgggtccagaggaaatcactcgcgatattccaaacgtcggggaagatgctctg
aaaaacctggacgaacgcggtatcatccgtgttggtgcggagattcaggacggcgacatt
ctcgttggtaaggttacacctaaaggggttactgagctgacagcagaagaacgcctcctg
catgccatcttcggtgaaaaagctcgtgaagttcgtgatacatccctgcgcgtaccgcat
ggtggttccggtatcatcgtagacgtaaaagtatttacgcgtgagaatggcgacgaattg
ccaccaggcgtaaaccaactcgttcgcgtttacatcgcccaaaaacggaaaatctccgtg
ggtgacaaaatggctggtcgacatggtaacaaaggggttatcgcccgcatcatggcggaa
gaagatatgccattcctgccagatggttctccagtagagatcgtactcaacccgttgggc
gtaccttcgcgtatgaacatcggtcaggtattggagactcacttgggtatggcagcgaag
cttctgggtatccacgtagcaaccccggtatttgacggtgcacgtcaggcagaagtattc
gaaacgttggcagaagcaggtctggatcgtgacggaaaaacgatcttgtttgatggtcgt
actggtgaaccgtttgatcgccgtgtaacagttggttgtgtatacatgctgaaactggct
cacttggttgacgataaaatccatgctcgttctactggtccttactctcttgttacgcag
caaccattgggtggtaaagctcaattcggtggacagcgtttcggggagatggaggtttgg
gcattggaagcatacggtgctgcctacaccttgcaagaaattcttactgtcaagtcggat
gacgtcgtgggccgcgtgaaaacgtacgaagcgatcgttaagggcgaaaacgttccagaa
ccaggtgttccagagtccttcaaggtattgatcaaggaactgcagagcttgggtatggac
gtgaagattctgtccggtgacgagcaggagattgaaatgcgtgaaatggaagatgaggat
gaaggtaacggtgaaaaactgaacctcgttctcgaaggcggaagcttgaacgaagagtaa
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integrated database retrieval system
