Branchiostoma belcheri (Belcher's lancelet): 109472054
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Entry
109472054 CDS
T07532
Name
(RefSeq) collagen alpha-3(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel04512
ECM-receptor interaction
bbel04518
Integrin signaling
bbel04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109472054
04518 Integrin signaling
109472054
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109472054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbel04147
]
109472054
00536 Glycosaminoglycan binding proteins [BR:
bbel00536
]
109472054
Exosome [BR:
bbel04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109472054
Glycosaminoglycan binding proteins [BR:
bbel00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109472054
Hyaluronan
Extracellular matrix or blood plasma proteins
109472054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
SEA
Motif
Other DBs
NCBI-GeneID:
109472054
NCBI-ProteinID:
XP_019627188
UniProt:
A0A6P4YS65
LinkDB
All DBs
Position
Unknown
AA seq
2258 aa
AA seq
DB search
MQGTVDIVSLRVTQILPGSTATTTTVDVEVVTTASQVSSVQGRLTNITAPGQILGGATVI
SSQVALTAPVCSVRVDLVFVLDGTGSVGADNFERMKTFVQKMISDFEIGSEATRIGVVVY
SHRAELAISLDAFEDGGALQDAVAAIAYPGGYTRTGAAIDYTTTSAFSTRNGAREGVVRV
AIILTDGISYDDPSEPAQSMRKAAIITYAVGIGSNLDRDQLDVIAGVPENLMMLDNFSML
DNLRTTLPGRVCAGATSEQILIRILITSTRFDVSLLNANSTAFQTILYQINTAFLGYFPG
VPGFTAPLVSLAPGPTGDSVVAMCLGWVPAFASNTVRSGLLTAPAQLNNLTIDTTFTSVV
AARTSVVFARLVVNVNYTAEYQVRGSAAYDALILRLQYQVLNQFSAMQGTVDIVSLRVTQ
ILPGSTATTTTVDVEVVTTASQVSSVQGRLTNITAPGQILGGATVISSQVALTAPVCNVR
VDLVFVLDGTGSVGADNFERMKTFVQKMISDFEIGPEATRIGVVVYSHRAVLALRLDAFE
DEGALQDAIAAIAYPGGYTLTGAAIDYTTMFAFSTRNGAREGVIRVAIILTDGISFDDVA
NPAQSMRKAAIITYAVGIGSNLDRDQLDIISGSRRNLFMLDDFSKLEDLRTQLPSRVCDV
GSSVVSIVSLVVTSQEYRLELLDANSTLTFGLIAEIQFALNAISDTTQGLLTWQSICFLP
GPFGAVAVSLQLAAQPFAVNTIETTIATLTSLGSLQINPSLTTITDGATRRSIIITLELH
LTYTVEFGDVSSVSYTNLSVILENGLLQKFTDSPADIQSVSITSVAPGPTATTTSVTVSV
VTLGANVDATTQIIVNTTAPGARIGPLPVVSSTVGDTTPPCSAVADIVFVVDGTGSVGLE
NFERMKTFISQLLAFLDIGENAVRVSIVQYAVQARTEFFLDQYFDLQALQDAVEAIQYMG
GYTKTGNAIDFATNVHFDVRNGARATVTKIVVVITDGISQDDVQRPARRMHQAGIVTIAV
GVGSNLDSDQLLAIAGDPNTLLSLDDFDRLQDLTTTLPSMLCDVGTSQQIVVSICVTTTY
DVLILNANSSVSTALFQQVVQGLTTTVTSSPGIAALQPIGFAPGCGGVVSTVQCAVAPFA
LDTVQTTFQDLQPDFGDLTIDPGQTTVVSADTRTTIIVTVELTLTYIEDYQDTSSTAYVD
LGVTIEDAVLQAVTTTPADVQSVSHYFSGSWNDRNKHIGDCECSGARCKCRRHHPAVADI
VFVWTALAASGLENFERMKTFISQLLAFLDIGENAVRVSIVQYAVQARTEFFLDQYFDLQ
ALQDAVEAIQYMGGYTKTGNAIDFATNVHFDVRNGARATVTKIVVVITDGISQDDVQRPA
RRMRQAGIVTIAVGVGSNLDSDQLLAIAGDPNTLLSLDDFDRLQDLTTTLPSMLCDVDDH
RTSSPGIAALQPIGFAPGCGGVVSTVQCAVAPFALDTVQTTFQNLQPDFGDLTIDPGQTT
VVSADTRTTIIVTVELTLTYTEDYQDTSSTAYVNLGVTIEDAVLQAFSTTPADVQSVSIT
SVAPGTTATSTSVTVSVVALGANVDATTQIIINTTAPGTQLGNLPVVSSSVGDTTPPCSA
VLDLVFVLDGTGSVGEENFERIKAIVQKLVTNFNIGAGQTRVGIIQYANIQQMEISLDAY
SDVDSLVEAIGNIGYIGGNTLTGQALDYTWKFGFSPNNGARTGVVQVAIVITDGVSDDEV
SNPAQRMRKAQIVTYAVGIGSNLDNDQLLSIAGTAGNVVMLSDFNRLTDLATTLPQQVCE
VGRGVQLFIGLSVPSVTFDDNLLNADSSAYVTLVQQVNSGVTQTLGQIAGLNVIQVINFV
PVDTGVVVYCQASAGLWASDSVTQSIVSLTASFGPLTIDPAATEVAPLDAVNLYVSMEIQ
QAFSGELMNPSSADFQTLSTSLQINTFNTIQGALSVSIIQFSAGSTATTTYVVLLIVVKT
SVQTTFIQNFDTAIQSGSYGTLTVVSGSIAITEPPCPNELDIIFVLDGSGSVGSDNFEKI
KTFVSKTVARFNIGLTETQFGVIQYNTQPHSEILLNDHQDAASLQQAISDIRYLQGGTNT
GQALRYLANNAFSTKNGARAGVSKMAIVVTDGQSADDVVRPALNAGKEGIVLYAVGIGGE
VDYQELRDIASSADKVFNVTDFSGLQSIGNTLPDQVCQTGVEVFVQIPITSQTFTGELLN
PLSVEYTSFSAVIAGWATTTLQSVSGFQSYQIVAIRPS
NT seq
6777 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggaccgtagacatcgtgtctctccgagtgacacagatccttccgggctcgaca
gccacaactactacagtcgacgttgaggtagtgaccacggcatcccaagtgtcgagcgtc
caaggaaggctgactaacattaccgcacctggtcaaatacttggtggggctaccgtcatc
tcttcgcaagtggccttgacagctccagtttgcagcgttcgagtggatcttgtcttcgtc
ttggatggaactggtagcgtgggagccgacaattttgagaggatgaagaccttcgtgcag
aagatgatcagcgactttgagattgggtccgaggcaacgcgcatcggcgtggtcgtctac
tcccaccgtgcagagctggcgatcagcttggatgcctttgaggacggaggagctctgcaa
gatgcggtcgctgccatcgcatacccgggcggttacactcgaacaggagcagccatcgac
tacaccaccacgtctgccttctccacaagaaacggggctcgagaaggagtcgtcagagta
gccatcatcctcaccgatggcatatcatatgatgacccttcggagccggctcagagtatg
cgcaaggcggccattatcacctatgccgtggggatcggaagcaatcttgaccgcgatcag
ctggatgttattgccggagtgccagagaacctgatgatgctggataacttcagcatgctg
gacaacctgcgaaccaccctgcccggtcgagtctgtgccggcgctaccagtgaacagatt
ctcatcagaatcctcatcacatcaacacgattcgatgtctctctgttgaacgccaactct
acagcattccagaccatcttgtaccaaatcaacacagccttccttggctacttccctgga
gtccctggattcaccgcacctctggtgtctctagcacctggtcctactggtgactccgtc
gtggccatgtgtttgggatgggtgccagcgtttgcctccaacaccgtaagatctggttta
ctgaccgcgccagcacagctcaacaatctaaccatcgacacgacattcacaagtgtcgta
gctgcacgtacatccgtggtcttcgccaggctagttgtgaatgtgaactacacagcagag
taccaagtccgtgggtctgctgcatacgacgccttgattcttcggctgcaataccaggtg
ctgaatcagttctctgcaatgcaagggaccgtagacatcgtgtctttgcgagtgacacag
atccttccgggctcgacagccacaactactacagtcgacgttgaggtagtgaccacggca
tcccaagtgtcgagcgtccaaggaaggctgactaacattaccgcacctggccaaatactt
ggtggggctaccgtcatctcttcgcaagtggccttaacagctccagtttgcaacgttcga
gtggatcttgtcttcgtcttggatggaactggtagcgtgggagccgacaactttgagagg
atgaagaccttcgtgcagaagatgataagcgactttgagattgggcccgaggcaacgcgc
atcggcgtggtcgtctactcccaccgtgcagtgctggccctcaggttagatgcatttgag
gacgaaggagcactacaagatgcgatcgctgccatcgcatacccgggcggttacaccttg
acaggagcggccatcgactacaccaccatgtttgccttctctacaagaaacggtgctcga
gaaggagtcatcagagtagccatcatcctgaccgatggcatatcatttgatgacgtagcg
aatccagctcagagtatgcgcaaggcggccatcatcacctatgccgtggggatcggaagc
aatcttgaccgcgatcagcttgacataatttctggatcccgacgtaacctgtttatgttg
gatgactttagcaaactagaagacctgagaactcaattgcctagccgggtttgtgacgtt
ggctccagcgttgtgtccatcgtgtccttagtagtaacatctcaagaataccgactggag
cttctggatgctaattctacactgacgtttggtttaattgctgagatccaattcgcttta
aatgctatcagtgataccacacaaggactgttaacctggcagtcaatttgcttcctacca
gggcctttcggagccgtcgccgtgtcactgcaacttgcagcacagccatttgctgtcaat
accattgaaacaacaatcgccaccctcacatcactgggaagtcttcaaatcaatccatca
ttaacaactataacagatggcgctacaagaagaagtattatcatcacgctggaactccat
ctcacctacacagtggaatttggggatgtttcgtcagtgtcctataccaacttgagtgtc
attttagaaaatgggttactgcaaaaattcacggacagcccagcagacatccagtcggta
tctattacgtcggtggctcctggaccgaccgcaactaccacatcggtaactgtgagtgta
gtgacgctaggtgcaaatgtcgacgccaccacccaaatcattgtcaacactacagcgcct
ggagcacggattggacccttgcctgtagtctcgtctacggttggagatacgactcctccc
tgtagtgcagtagcagacattgtctttgttgtggacggcactggcagcgtcggcctggag
aacttcgagcgaatgaagaccttcatcagccagttgctcgccttcttggatattggagaa
aatgccgttcgcgtctctatcgttcagtatgcagttcaagcccgcacagagttcttcctt
gaccagtacttcgacctccaggccctgcaagacgcagtggaagctattcaatacatgggc
ggctacacaaagacgggtaatgccatcgacttcgccaccaatgtccacttcgacgtcagg
aacggcgcccgagccaccgtgaccaagatagttgtcgtcatcaccgacggcatatctcag
gacgacgtccaacgtcctgctcggaggatgcaccaggcaggaatcgtcaccatcgctgtt
ggtgtgggctccaacctggatagcgaccagctactggctatcgcaggagatcccaacact
ctcctgtctcttgatgatttcgacagactacaggacttgactactaccctgcccagcatg
ctttgcgacgttggtaccagtcagcagattgtcgtctccatctgtgtcacaactacatac
gatgtcctgattctcaacgccaattccagtgtttccacggcacttttccaacaagttgtt
caagggttgacgaccaccgttacaagcagtcctggtatagcagccctccaacccattggc
ttcgcacctggctgcggaggcgtagtttcgaccgtgcaatgcgccgttgctcccttcgcc
ctggatactgtacagaccaccttccaggatctacaacccgacttcggagacttgacgatt
gatcctgggcaaactaccgttgtgtctgctgacaccagaacaaccatcatagtcacagtg
gagctaactctcacctacatcgaggactaccaagatacgtcgtcaacggcctatgtcgac
ttgggtgtcactatcgaagatgcggtgctccaagcagtcaccaccaccccggcagacgtc
cagtcggtatcccattacttcagtggctcctggaacgaccgcaacaagcacatcggtgac
tgtgagtgtagtggcgctaggtgcaaatgtcgacgtcaccaccctgcagtagcagacatt
gtctttgtgtggacggcactggcagcgtcgggcctggagaacttcgagcgaatgaagacc
ttcatcagccagttgctcgccttcttggatattggagaaaacgccgtacgcgtctctatc
gttcagtatgcagttcaagcccgcacagagttcttccttgaccagtacttcgacctccag
gccctgcaagacgcagtggaagctattcaatacatgggcggctacacaaagacgggtaat
gccatcgacttcgccaccaatgtccacttcgacgtcaggaacggcgcccgagccaccgtg
accaagatagttgtcgtcatcaccgacggcatatctcaggacgacgtccaacgtcctgct
cggaggatgcgccaggcaggaatcgtcaccatcgctgttggtgtgggctccaacctggat
agcgaccagctactggctatcgcaggagatcccaacactctcctgtctcttgatgatttc
gacagactacaggacttgactactaccctgcccagcatgctttgcgacgttgacgaccac
cgtacaagcagtcctggtatagcagccctccaacccattggcttcgcacctggctgcgga
ggcgtagtttcgaccgtgcaatgcgccgttgctcccttcgccctggatactgtacagacc
accttccagaatctacaacccgacttcggagacttgacgattgatcctgggcaaactacc
gttgtgtctgctgacaccagaacaaccatcatagtcacagtggagctaactctcacctac
accgaggactaccaagatacgtcgtcaacggcctatgtcaacttgggtgtcactatcgaa
gatgcggtgctccaagcattctccaccaccccggcagacgtccagtcggtatccattact
tcagtggctcctggaacgaccgcaacaagcacatcggtgactgtgagtgtagtggcgcta
ggtgcaaatgtcgacgccaccacccaaatcatcatcaacaccacagctccggggacacag
ctcggaaacttgcctgtagtgtcatcttctgttggagatacaacgccaccatgttctgcc
gttttggatcttgtgtttgtgcttgatggcactggtagtgtcggtgaagagaactttgag
aggataaaggctattgttcagaagttagtgacgaatttcaacataggtgccggccagacc
cgcgttggtataattcagtatgccaacattcaacaaatggagattagtcttgatgcgtac
agtgatgttgacagcttagtggaagccattggaaacatcggatacataggtgggaacacc
ctaaccggacaagctcttgattacacctggaagtttgggttttctcccaacaacggtgct
cgcactggtgttgtgcaagtggccatagtaatcacggatggggtttctgatgatgaagta
tcaaacccggcacaaaggatgcgcaaggcacagattgtcacctacgcagttgggattggc
agcaaccttgacaatgatcaactcctctctattgctggcaccgcaggaaatgtcgttatg
ctttcagactttaaccgtttaacagacttggcaactactcttccacaacaagtttgtgag
gtcggcagaggtgtccagctcttcatcggtctatctgtcccctctgtgacattcgacgat
aatctcttgaatgcggactcttcagcatatgtgactcttgtgcagcaggtcaattcaggg
gtgactcaaactttgggccagattgcaggactgaatgtcatccaagtcatcaactttgta
cctgtggatactggagttgttgtttactgccaggcgtcggctggtctttgggcatcagac
tccgtgactcagtccattgtctcactgacagcctcttttggacccttgactattgaccca
gcagcaaccgaggttgcaccattggatgctgtgaatttgtatgtatcgatggagatccag
caagcgttcagtggtgaactcatgaatccatcaagtgctgacttccagacacttagtacc
agcctacaaatcaatacattcaacacaattcaaggagcattgtctgtcagcataattcaa
ttcagcgcaggttccactgccaccaccacctatgtcgtactgctcatcgtggtgaagaca
tcagttcaaactaccttcatccaaaactttgatactgccatccaatctggctcatatgga
actttgactgttgtctctggttctatcgcgataacagagcctccctgtccaaatgagctg
gatatcatctttgtgctggatggatctggcagtgtcggaagtgacaactttgagaagata
aaaaccttcgttagcaagactgtggcccgcttcaacattggccttacagagacccagttc
ggtgtcattcagtacaatacccagccccattctgagatcctcctgaatgaccatcaagac
gcagcgtctctccaacaggccatctctgatatccgctaccttcagggtggcacgaacacg
ggacaagccttacggtatctcgcaaacaacgccttctcgaccaagaacggtgcccgtgca
ggagtcagcaagatggcgattgttgtcaccgatggccagtccgctgacgatgttgtgcga
cctgcactgaatgctgggaaagagggtatcgtcttgtacgctgtcgggattggaggagag
gtagactaccaggagctgcgggacattgccagctcagccgataaggtctttaacgtcaca
gactttagtggattgcagagcatcggaaatacccttccagaccaggtctgccaaactgga
gttgaggtctttgtccaaatccccatcaccagccagacgttcactggagaactgctcaac
cccctgtcagtggaatatacctccttcagtgctgtcattgcaggctgggcaacaacaaca
ttgcagagtgtgtctgggttccagagctaccaaattgtggccatcagaccttcgtaa
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integrated database retrieval system
