Branchiostoma belcheri (Belcher's lancelet): 109480446
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Entry
109480446 CDS
T07532
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109480446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109480446
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109480446
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109480446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
109480446
NCBI-ProteinID:
XP_019638195
UniProt:
A0A6P4ZA31
LinkDB
All DBs
Position
Unknown
AA seq
2539 aa
AA seq
DB search
MNLDSLSLALSQISYAVANLSKKNYKSSVAEISRLVDQHGPEADRHLYRCLFSHVDFSGD
GKSGGKDYHQTQLLIQECETLITKPTFVSTLCYAVDFPLHHQKSLKPSVQLFPQLTKVLK
LNKIQEVVFGLALLNSSILEVRNYAAQFVKQKLPDLLRTFTDPDLNSGCEESLNDIAIEV
LHLLLINLHGPKDKFGIGAEQKEAFIAILKQDFPNERCPVVLTPFLYPDKQGITIERLVS
QAEASTVPRDMMEGSLAEMMQEVGYGCCASVEECRNTLLQFGVREVTPAVVARVLGMMAR
THVGLSDSIPLQSLTSPGGSIWSEGKDKSEGGQSQSWSVDVFVDVLQDLAPHLNWREVIF
ELDHPGLILKDAQGLRLLTSALTRALANQDVFPIDLLYRQWKNTEGQLSWFQVALASPDV
FCFADYPCHQVVIDILKSPPDDENREIATWKSLDLIETLLRLSELGHYDQVKGLFNFPIK
HCPDMLVLGLLQVNPNWHTLRHELISTLMPIFLGSHPNSAIVLHYAWHGQGQSPSIRQLV
MHSMAEWYMRGEAHDQQRLSRILDVAQDLKALSMLLNGTPFAFVIDLACLASRREYLKLD
KWLTDKIREHGEPFIQACVTFLKRRVPQVMGGPPPDKEPPKSAQLPPETIGTMLACLQAC
ANNVSQELSETILTMVGNCSQILNKARQPPPGAANVSIKQRPPSGLPPTSGLDNISPVIT
SQPHLSPGWKGDDLPYVSQIDPLAGISSLSLGGNSGTGTIGPGPLAPGNIGGGPIGSGTI
GSGTIGSGAIGTGSIGPGSIGPGPIGGGFQSANPLAASFAPPQSPQKQFPVSRDQFPPFS
SSGQTSFSSMGSLTSQMQGLGSGSSSGGLPSSNPLAAAFAPPPTSQKDSASRDQFPPLST
SGQTRFSSMGEFTSQIQGLGTTGSLGMAGMGGAFGQKTGSIGSSQQAALAQQKAASSLRQ
DVSNVWPEMNQQFSKEIDDEANSYFQRIYNHPPNPTMSIDEVLEMLKKFRDSPIKRERDV
FHCMLRNLYQEYRYFHQYPTRELQITATLFGGLIAEGIVSYMALGIALRYVLEALRKPHG
SKMYYFGIAALDRFKTRLKDYPQYCQHLAAIPHFQEFPAHLIEYVEFGQQSREPPIKMAA
PSTSPPLSLGGKTSSTMSTTLTTTVTTTAVSTASGGESPFKATSKVSSTPPLRPGQSPSI
ANATNIDTLLAGNDAQNKKLEPPEVLQDKVAFIFNNLSQSNLNQKTEELRDAVGEEYLPW
VSQYLVMKRASIEPNFHTLYSNFIDVLKNPEVTQMVIKETFRNIKVLLQADKGAANFSDR
SLLKNLGHWLGMLTLAKNKPILQIDIDIKSLLLEAYHKGHQELLYVVPFVAKVLESCAKS
KVFKPPNPWTLAIMNVLSELHQEPDLKLNLKFEIEVLCKTLNLDIGDLKPGNYLKDKDKL
SQIEEQLSAPKNDKPVEEVPHASSTTGLPSVTSTTTTTTTTAVPTIPPEPKFSFHDVNTM
TFAGLAPHISISNNVPLFTAHPQLKACVRPAIERSVQELVHPVVERSIKIAMTTCEQIVK
KDFALDPEEARMRAAAHHMVRYMTAGMAMITCREPLYVSIDNNLKTSFLTTLRGATQQQK
EMIEQAASMIAQENVELACAFIQKSAVEKAIPEMDKRLATEFELRKHARNEGRRYCDPVV
LTYQAERMPEQIRLKVGGVTAQQTAVYEEFARQIPGFLPTNEANQPSGFLAKPMPPALSA
VNRDQAATEDKEARDGMKSFATDEITQIYDRIISELEQHLHAILAPPTNQQVAAMHSLLE
AVILARNSREIVTALALLQKAVEGLLDGLTQLPSDPELALRFRDAHLLVLKGLQDQRAYG
PHWTNKQVTRVLCECREELKYNLEAVNCLVRARLINMQQYDTHLAQSMENGLNFMAVTFA
MQLVRLHLIDERNSSDVTEADLYNTVENLARIAAHSRNAPEGLAALVDVIRQNHDTILDR
APGGPTSMMHSGISQAREYDDPPGLHEKSEYLLREWVNMYHSPAAGRDSSKAFQVFVQQM
HQQGILKTDDLITRFFRLCTEMCVDLCYRALSEASHNPTLLRAKCFHTLDAYVRLIALLV
KHSGDATNTVTKINLLNKVLGIIVGVLLQDHEVRGTDFQQLPYHRLFIMLLLELNAPEHV
LESINFQVLTAFCNTFHILRPSKAPGFAYAWLELVSHRVFIARMLALTSNQKLGVNKSVS
SVLQGWGMYAQLLIDLFKFLAPFLRNVELTKPMQLLYKGTLRVLLVLLHDFPEFLCDYHY
SFVDVIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLPEINHPPRILTNFAALIQPS
SFKKDLDTYLKTRAPVTFLSDLRSNLQVSTEPGLCYNISLMNALVLYVGTQAITYIHTKG
STPSMNTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAE
ANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTFKFWNHDFVHCAPEIEKLFE
SVARSCMQQKQPQHVEAHE
NT seq
7620 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggactcgttgtcgctggccctgtctcaaatcagttacgctgtggcgaatctg
agcaagaagaactacaagtcgagcgttgcggaaatctctcgtcttgttgatcaacacggg
cctgaggcagatcgtcacttgtaccgttgcctcttctcacatgtggatttcagtggggat
ggtaaaagtggtggaaaagactatcaccagacacagctgctgatccaagagtgtgaaacc
ctgataaccaagcctacctttgtgtctacattgtgctacgctgtagacttccccctccac
catcaaaaaagtttaaagccgtccgtgcagcttttccctcagctgaccaaggttctaaaa
ctgaacaaaatccaggaggttgtgtttgggcttgcattgttaaattcgtccatactagag
gttcgaaactacgctgcccagtttgtgaaacagaagctccccgatctcctcagaaccttc
acagatccagatctgaacagcggttgtgaggaaagtctgaacgacatcgccatcgaagtt
ctgcacctgctgcttataaacctacacggacccaaggacaagttcggcatcggagctgag
cagaaggaagctttcattgctatcctaaaacaagatttccccaacgagaggtgtccggta
gttctgacacctttcctctacccagacaagcagggcatcaccatagaacgactggttagt
caagcagaggcaagcactgtgccaagagacatgatggagggttctttagctgaaatgatg
caagaggttggatatggctgctgtgccagtgttgaggagtgcaggaacaccctgctacag
ttcggagtgcgtgaagtaacccctgctgtggtggcccgggtactgggaatgatggctcgc
actcacgtcggcctctcagatagcattccactacagtccctgaccagccctggagggagc
atatggagtgagggaaaggacaagtcggagggtggccagtcccagtcctggtctgtggat
gtcttcgtagacgtgctacaagatctggccccccacctgaactggcgcgaggtgatattt
gagctggaccacccaggtctgatcctgaaggacgcccagggtctgcgtctgctgacctct
gcgctaacccgggccctggccaatcaggacgtgtttcccatagacctgctgtatcgccag
tggaagaacacagagggacagctgtcgtggttccaagtggccctggctagtcctgatgta
ttctgcttcgctgactacccctgtcaccaagtcgtcatcgacattctcaagtcaccgcct
gacgacgaaaacagagaaatagccacatggaagtcactagacttgatagaaaccctgctg
cgtctgtctgagctcggtcactacgaccaggtcaaaggtctcttcaactttcccatcaag
cactgcccagacatgctggtcctgggactactgcaggtcaatcccaattggcacaccctg
cgtcacgagttgatctccaccctgatgcccatcttcctgggctcccaccccaactccgcc
atcgtcctgcactatgcctggcacggccagggacaaagtccctccatacgccagctagtc
atgcactccatggctgagtggtacatgaggggagaggcacacgaccaacagaggctctcc
aggattttagacgtcgcccaggacctcaaggcactctccatgctgttgaacggcactccc
tttgccttcgtcatcgacctggcctgcctggcctcccgtcgagagtacctcaagctggac
aagtggctgacagacaagatccgcgagcacggtgaacccttcatccaggcctgcgtcacg
ttcctgaaacgccgcgtcccgcaggttatgggtgggccccctcctgacaaggagcctccc
aagtcagcgcagctccccccagagaccatcggcaccatgctggcctgtctgcaggcctgc
gccaacaatgtgtcacaggagctgtccgagaccatcctcaccatggtgggcaactgtagt
cagatactgaacaaggcacggcagccgccgcccggagctgctaatgtttccatcaagcag
cgcccgcctagcgggctgcctccgacatcaggcctggacaacatctctcctgtcatcaca
tcacagccgcatctgtccccaggttggaagggagacgacctcccgtacgtgtcacagata
gacccgctagccgggatatcttccttatcactgggtgggaactctggaactggtaccatc
ggacctggaccccttgcgcctggcaacatcgggggcggaccgatcggatcggggactatc
ggatccggaactatcggatcaggggccatcgggacggggagtatcggcccgggtagtatt
ggcccgggaccgatcggcggggggttccagtcggcgaatccgctcgctgcgtcgttcgcg
ccgccgcaatcgccgcagaagcagttcccggtttcccgtgaccagtttcctcccttctcc
agctcaggacagacgtccttttcatccatgggcagtctcacgtctcagatgcaaggtctg
ggatctggcagcagcagtggtggcctgccctcctccaaccccctggcggccgccttcgcc
ccccctcccacgtctcagaaggactcggccagccgtgaccagttcccgcccctctccacg
tcaggacagacacgattctcctccatgggagagttcacttcacagatacaaggactggga
acgaccggcagcctgggcatggcaggcatggggggtgcgtttggacagaagactgggagc
atcgggagttcccaacaggccgcactggcacagcagaaggctgcgagtagtctgcgccaa
gacgtgtcgaacgtgtggccagagatgaatcagcagttctccaaggagattgatgacgag
gccaacagctacttccagcgcatctacaaccacccgcccaacccaaccatgtccatcgac
gaggtcttagagatgctcaagaagttcagagactctcccatcaaaagagaaagggatgtt
ttccactgtatgctgcggaacctgtaccaggagtatcgctacttccaccagtacccgacc
agggagctacagatcaccgctactctgtttgggggactcattgctgaaggaatcgtctcg
tacatggcactaggcatagccctgaggtatgtgttagaggccctgaggaagccacatgga
agcaaaatgtactacttcggtatagctgctctggatcgtttcaagactagattgaaggac
tacccccagtactgccaacatctcgctgccataccacatttccaggagttccctgcacat
ctcattgagtatgtagagttcggccaacagtcgcgagaacctcccataaagatggctgcc
ccctccaccagtcctccgctgagcctcggcggtaaaacgtcgtccacaatgtccacaacg
ttaacaacgaccgtaacaacgactgccgtcagcacggcgtctggtggtgagtctcccttc
aaagctacaagtaaggtcagctctacaccacccctcagacctgggcagagcccttctata
gccaatgcgacaaacatagacaccctcctggcaggaaacgatgcccagaacaagaagtta
gaaccaccagaagtgcttcaggacaaagtggctttcatcttcaataatctttcccagtcc
aacctcaaccagaagacggaagagttacgtgatgccgtaggtgaggagtacctaccctgg
gtgtcgcagtacctggtgatgaagagagccagcatcgagcctaacttccacaccctgtac
tccaacttcatagacgtcctcaagaacccagaggtcacacagatggtcatcaaggagacc
ttccgcaacatcaaggttttacttcaggctgacaaaggagctgccaacttctctgaccgc
tccctgctgaagaacctgggacactggctgggcatgctgactctggccaagaacaagccc
attctacagatagacatagacatcaagtcccttctactggaggcctatcacaaaggacac
caggaactcctgtatgtggttccgtttgttgccaaagtcctggagtcctgtgcgaagagt
aaggtgttcaaaccacccaacccctggacactcgccatcatgaacgtactgtctgaactg
caccaggaaccagatctgaaactcaacctcaagttcgagatagaagttctctgcaagacc
ctgaatctggacattggtgacctgaaaccaggaaactacctgaaggacaaggacaagctc
tctcagatcgaggagcagctatctgcgcccaagaacgacaaaccagtggaggaagtccca
cacgcctcgtcgaccacggggctgccctccgtgacctctactaccaccaccaccaccaca
accgctgtgcccaccatccctccagaacctaagttcagcttccatgatgtcaacaccatg
acgtttgccggcctggctccacatatctccatcagtaataacgttcccctgttcacggcc
cacccccagctgaaggcctgtgtccgccctgccatcgagcgctcggtccaggagctggtc
catcctgtcgtggagaggtccatcaaaatagccatgacaacctgtgaacagatagtcaag
aaggacttcgccctagacccagaagaggcgcgtatgcgagcggcggcacaccacatggtt
cgctacatgaccgcggggatggcgatgatcacatgccgggaacccctgtatgtcagcata
gacaacaacctgaagaccagcttcctcactacactaaggggtgctacgcagcagcagaag
gagatgatcgagcaggctgccagcatgatcgcccaggagaacgtagagctggcctgcgct
ttcatccagaagtctgccgtggagaaggccatcccggagatggacaagcgcctggccacc
gagttcgagctgcgcaaacatgcgaggaatgagggccggcgctactgcgaccccgtcgtg
ctgacctatcaggccgaacgcatgccagaacagatccggctcaaggtagggggcgtgaca
gcacagcagactgctgtgtatgaggagttcgcccgacagataccagggttcctgcccacc
aacgaggccaaccagccaagcggcttcttagcaaagccaatgcctcctgccctttcggct
gttaatcgtgaccaggccgctacagaggataaagaagccagggatggcatgaagtccttt
gcaacagacgagatcacgcagatctacgaccggatcatcagcgagctggagcaacacctg
cacgccatcctggccccgcccaccaaccagcaggtggccgccatgcacagtctgctcgag
gctgtcattctcgcgcgcaactctcgcgagatcgtcaccgcgctcgcactgctgcagaag
gctgtggagggtctgcttgacggtctgacccagctgcccagtgacccagagctggccctg
cggttccgtgatgcccacctcctggtgctgaagggtctacaggatcagcgtgcgtacgga
ccacactggaccaacaaacaagtcaccagggttctgtgtgagtgtcgagaggaacttaag
tacaacctggaggccgtgaactgcctggtccgagctcgactcatcaacatgcagcagtac
gacactcacttggcacagagcatggagaacggtctgaacttcatggcggtgacgtttgcg
atgcagctggttcgcctgcacctgatcgacgagcggaacagctcggacgtgacggaggcg
gatctgtacaacaccgtggagaacctggcccgcatcgccgcgcactccagaaacgctccg
gaaggccttgctgctctggtggacgtcattcgccagaaccacgacaccatcctggaccgc
gccccgggagggcccacctccatgatgcactctgggatatcccaggcccgggagtacgac
gaccctcccggtctccacgagaagtcggagtacctcctgcgggagtgggtcaacatgtac
cactcacccgccgccggacgggacagctccaaggccttccaggtgttcgtacaacagatg
caccagcagggtatcctgaagaccgacgacctgatcacgcggttcttccggctgtgtacg
gagatgtgcgtggacctgtgctaccgtgcgctgagcgaggcctcccacaaccccaccctg
ctgcgcgccaagtgtttccacacgctggacgcctacgtgcggctcatcgcgctgctggtc
aagcacagcggagacgccaccaacaccgtcaccaagatcaacctgctcaacaaggttctg
ggcatcattgttggagtcctgctgcaggaccacgaggttcgagggacggacttccagcag
ctgccgtaccaccgcctcttcatcatgctgctcctggagctcaacgcacccgaacacgtc
ctcgagtccatcaactttcaagtcctcacagccttctgcaacacattccacatcctgcgc
ccgtccaaggcgcctgggtttgcctacgcctggttggagctggtgtcacaccgggtcttc
atcgctcgcatgctggccctcacatccaaccagaaactcggagtcaacaagagtgtgtct
tcagtgctccagggttggggcatgtacgcccagctgctcatcgatctgttcaagttcctg
gctcccttcctgcgcaacgtggagctcaccaagcccatgcagctgctgtacaagggcacc
ctgcgcgtgctgctggtgctgctgcatgatttcccagagttcctgtgtgactaccactac
agcttcgtggacgtcatcccgccaaactgcatccagatgaggaacctcattctcagtgcc
ttcccccgaaacatgcgcctgccagaccccttcactcctaacctaaaggtggacatgttg
ccagagattaatcaccctccccgcatcctcaccaactttgctgccttgattcagccttct
tccttcaaaaaggacctggacacgtacctgaagacgcgagcgcccgtgacgttcctgtct
gacctgcgcagtaacctgcaggtgtcaacggagccgggtctgtgctacaacatctcgctg
atgaatgccctggtcctgtacgtgggcacgcaggccatcacctacatacacaccaagggc
agcacgccctccatgaacaccatcactcactccgcacacatggacatcttccagaacctc
gctgtcgacctggacacagaaggacgatacctgttcctgaatgccattgcgaaccagctg
cgttaccccaacagccacacccactacttcagctgcactctactgtacctgtttgccgag
gccaactctgaggccatccaggaacaaatcaccagggtgctgcttgaacggctgattgtg
aaccggcctcacccgtggggtctgctcatcaccttcatcgagctcatcaagaacccaaca
ttcaagttctggaaccacgacttcgtccactgtgctcctgaaatcgagaaactgttcgag
tcggtcgcccggagctgcatgcagcagaagcagcctcaacacgtcgaggcccacgagtga
DBGET
integrated database retrieval system
