Bifidobacterium bifidum BGN4: BBB_0927
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Entry
BBB_0927 CDS
T02135
Symbol
trpB
Name
(GenBank) tryptophan synthase, beta subunit
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf00260
Glycine, serine and threonine metabolism
bbf00400
Phenylalanine, tyrosine and tryptophan biosynthesis
bbf01100
Metabolic pathways
bbf01110
Biosynthesis of secondary metabolites
bbf01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BBB_0927 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
BBB_0927 (trpB)
Enzymes [BR:
bbf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
BBB_0927 (trpB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IGPS
PALP
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
AFL04519
UniProt:
I3WI06
LinkDB
All DBs
Position
complement(1114060..1116147)
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AA seq
695 aa
AA seq
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MSVLDELVAGALEDQRSRECVVSLEDVRRAALATPAPIDATRWLKRPDGIPVIAEIKRAS
PSKGHLSDIPDPAALAREYERGGASAISVLTEGRRFLGSLDDFDKVRSAVHIPLLRKDFI
VTDYQIYEARAHGADLVLLIVAALDDDKLAHLLELAHELGMAVLVETHTTEEIRRAVAAG
ARIIGINARNLKNLKVDVNKYAELAEGLPDDVIRVAESGVFGSVEVEDYGRAGADAVLVG
EGVATADDHVAAVQRLVKAGQRVKASESTPLSEHQGPYWGQFGGRYVPEALITALDELER
IYDQAKADPEFRKEFMTLQQRYVGRPSPLTEAPRFAALVKDRTGLDARIFLKREDLNHTG
AHKINNALGQALLVKRMGKTRVIAETGAGQHGVATATVCAMLGLKCRVYMGQIDARRQAL
NVARMRMLGAEVVEVTLGDKILKDAINEALRDWVTNVADTHYLLGTVAGPHPFPAMVRDF
QKIIGEEAKQQLQDWYGIDHPDAVCACVGGGSNAIGVMNAFLDDERVNLYGYEAGGNGPA
SGHHAIRFAPGTGQLGMFQGAKSYLLETDEGQTLDTYSISAGLDYASVGPEHAWLKEIGR
VNYSWATDEEAMNAFRDLSQTEGIIPAIESSHAVAGAFKAAADLKAKGYDKAVMIVNISG
RGDKDMATAGKWFGYLTDEQAAALDVTGAQGDTVA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttttggacgaattggttgccggggcgttggaagaccagcgttcccgcgaatgt
gtcgtgtctcttgaggatgtgaggcgggccgctctggccacgccggcgcctatcgacgcg
acgcgatggctcaagcgtccggacggcatccccgtgatcgccgaaatcaagcgcgcctcc
ccatccaaggggcatttgagcgatatccccgacccggcggccctggcccgcgaatacgag
cgcggcggtgcgagcgcgatttccgtgctcaccgaaggccggcggttcctcggctcactg
gacgatttcgacaaggtccgctcggcggttcacattccgctgctgcgcaaggacttcatc
gtcaccgactaccagatctacgaggcgcgtgcccacggcgccgacctagtgctgctcatc
gtcgccgcgctggacgacgacaagctcgcgcacctgcttgaactcgcccacgagctcggc
atggccgtgctcgtcgaaacgcacaccaccgaggagatccgccgcgcggtcgcggccggc
gcccggatcatcggcatcaacgcgcgcaatctcaagaacctgaaggttgacgtgaacaaa
tacgccgaactcgccgaaggactgcccgatgacgtgatccgcgtcgcagagtcgggcgtg
ttcggttcggtcgaggttgaggattacggtcgcgccggcgcggatgccgtgctggtgggc
gaaggcgtggccaccgccgacgaccatgtggccgccgtacaacgactagtaaaggcaggt
cagagagtgaaagcatccgaatcgaccccgttgagcgagcatcagggaccatattgggga
cagttcggcgggcgatacgtgccggaggcgctgatcaccgctctggacgagctggagcgc
atctatgatcaggccaaggccgaccccgagttccgtaaggaattcatgacgctgcagcag
cggtacgtcggccgcccgagcccgctgacggaagccccgcgattcgccgcgctggtcaag
gacaggaccggactcgacgcccgcatcttcttgaagcgcgaagacctcaaccacaccggc
gcgcacaagatcaacaacgcgctcggtcaggcgttgctcgtcaagcgcatgggcaagacc
cgcgtgatcgccgagaccggtgccggacagcacggcgtggccaccgccaccgtgtgcgcg
atgctagggctcaagtgccgcgtgtacatggggcagatcgacgcccgacgccaggccctc
aacgtggcccgcatgcgcatgctgggcgccgaggtcgtcgaagtgacactgggcgacaag
attctcaaggatgcaatcaacgaggcgctgcgcgattgggtgaccaacgtcgccgatacg
cactacctgctcggcacggtcgccggaccgcacccgttcccggccatggttcgcgacttc
cagaagatcatcggcgaggaggccaagcagcaacttcaggactggtacggcatcgaccac
ccggacgcggtgtgcgcgtgcgtcggcggcggatccaacgccatcggcgtgatgaacgcg
ttcctcgacgacgagcgcgtgaacctgtacggctatgaggcgggcggcaacgggccggcc
tcgggccatcatgcgatccgtttcgcaccgggcaccggacagctcggcatgttccagggt
gccaagagctacctgttggagaccgatgaaggacagactctcgacacgtattcgatttcg
gccggtctcgattacgcttccgtcggccccgagcacgcttggctcaaggagatcgggcgc
gtgaactactcctgggccaccgacgaggaggctatgaacgccttccgcgacctgagccag
accgagggcatcatccccgccatcgagagctcgcatgccgtcgctggcgccttcaaggcc
gccgctgatctgaaggccaagggatacgacaaggccgtgatgatcgtcaacatctccggc
cgcggcgacaaggacatggccaccgcgggcaaatggttcggatacctgaccgacgagcag
gccgcggcgctcgatgtcaccggcgcgcagggcgacaccgtcgcctga
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