Blattabacterium sp. (Blaberus giganteus): BGIGA_446
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Entry
BGIGA_446 CDS
T02109
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bbg
Blattabacterium sp. (Blaberus giganteus)
Pathway
bbg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BGIGA_446 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbg03021
]
BGIGA_446 (rpoC)
03400 DNA repair and recombination proteins [BR:
bbg03400
]
BGIGA_446 (rpoC)
Enzymes [BR:
bbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BGIGA_446 (rpoC)
Transcription machinery [BR:
bbg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BGIGA_446 (rpoC)
DNA repair and recombination proteins [BR:
bbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BGIGA_446 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AFJ90883
LinkDB
All DBs
Position
complement(457667..461917)
Genome browser
AA seq
1416 aa
AA seq
DB search
MINMIKMNRKKSNKFNKVTIRFASPEIILKESHGEVLKPETINYRTHKPERDGLFCERIF
GPVKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHISLVVPVVHIWCFRSSPN
KIGYLLGLPSKKLEMIIYYERYVVIQGGLGFRLDGSSFQKGDFLTEEEYLQALNKLPKGN
QQLDDSDPNKFIAKMGAECIENLLNLVDLDLLSMELRNQAHNETSKQRRTEALKRLQVVE
SFKEGKKNGGSPSCMIIHVLAVIPPELRPLVPLDGGRYAASDMTDLYRRVLIRNNRLKRL
IEIKAPEVILRNEKRMLQEAVDSLFDNSRKISAVKSEANRPLKSLSDTLKGKQGRFRQNL
LGKRVDYSARSVIVVGPHLKLHECGLPKDMAAELYKPFIIRKLIERGIVKTVKSSKKIID
KRDPMIWDILENVLKGHPILLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCAAFNADFD
GDQMAVHLPLSHGAILEAQLLMLASQNILNPANGSPITVPSQDMVLGLYYMTKPFLSNFE
KKVKGEKFIFYSPEEVEIAYNQGVVDLHSVIKVKVSLREKEKFIFKIIETTVGRVLFNQV
VPNKVGFINKSLTKKSLREIIGKILYLTDVPTTANFLDDIKELGFYNAFKGGLSFGLGDI
IIPDNKKDMVNNAIKQVDNVKMNYNMGLITNNERYNQVIDIWTNTNAMLTEKVMKYMRED
KQGFNSVYMMLDSGARGSKEQIRQLSGMRGLMAKPQKAGSSGGEIIENPILSNFREGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDAAQDVIIKIEDCKTLRGLEISALKKNE
EIVETLFDRILGRMSLNDIYNKENQLIINAGEMIDEKIAEIIDKSEIEIVEVRSPLTCEA
KMGICSKCYGRNLSTGEVVKKGEAVGVIAAQSIGEPGTQLTLRTFHVGGTAGNITESSQI
KAKYDGIVEFEDLKFVKTKQYSDKIGIVVSRSTEMKLFNLKKSSILMINNIPYGASLYVK
HGDHLKSGDMICKWDLYNAVIVAEFSGVISYQHLEQGVTFQVEIDEQTGFQEKVITEIRN
KNLIPTLKIINDKNEELKVYNLPVGSHLMVEDGEKIDIGKILVKVPRRTAKSGDITGGLP
RLSELFEARNPSNPAVVSEMDGIVSHGKIKRGNREIIVESKTGEIRKYLVKLSNQILVQE
NDYVKAGMPLSDGAVTPNDILNIRGPRAVQEYLIKEIQEVYRLQGVKINDKHFEVIVLQM
MRKVEVIDVGDTKFLDGNIEYKDDFVEENDRISQMKVIEDFGDSEIFKNGDIISYRDLRN
ENAVLKYKNKKLIKTRNAIPATARPILQGITRAALQTKSFISAASFQETTKVLSEAAISG
KIDCLHGLKENVIVGHKIPAGTGLREYENIFPDILK
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgataaatatgataaaaatgaatagaaaaaaaagcaataaattcaataaagtaactatt
cgatttgcttctccagaaattatattaaaggaatctcatggagaagtattaaaaccagaa
acaattaactatcgaacacacaaaccagaaagagatggacttttttgtgaacgaattttt
ggtccagtaaaagattacgaatgtgcttgtggaaaatataaaagaattcgttacaaaggg
attgtttgtgatagatgtggagttgaagttactgaaaaaaaagttagaagagaacgtatg
ggacatataagtcttgtagttcctgttgttcatatttggtgttttcgatcttctcctaat
aaaattggatatttattgggtttaccttctaagaaacttgaaatgattatttattatgaa
cgatatgttgttattcaaggaggattggggttccgtttagatggatcttcttttcaaaaa
ggggattttcttactgaagaagagtatttacaagctttaaacaaacttccgaaaggaaat
cagcaattagatgattctgatccgaataagtttattgctaaaatgggtgcggaatgtata
gaaaatcttttaaatctagtagatttggatcttttatctatggaattaagaaatcaagct
cacaatgaaacttctaaacaaagacgaactgaagcattgaaacgtttacaagttgttgaa
tcttttaaagaaggaaaaaaaaatggaggaagtccgtcttgtatgattattcatgtatta
gccgttataccccctgaattacgtcctttagttcctttggatggaggtcgttatgctgct
tctgatatgactgatttataccgtcgtgtgcttataagaaataatcgtttaaaaagactt
atagaaattaaagcgcctgaagttattttacggaatgaaaaaagaatgcttcaagaagca
gtagattcgctttttgataattctagaaagatttctgctgtaaaatcagaagcaaatcgt
cctttaaaatctttatccgatacgttaaaaggaaaacaaggtcgttttagacaaaatctt
cttggaaaaagagtagattattcagcacgatctgttattgtagtaggaccacatttgaaa
ttgcatgaatgtggactacctaaagatatggcagcagaactttataaaccttttattata
cgtaaattgattgaaagaggaattgtaaaaacagtaaaatcttccaagaaaattattgat
aaaagagatcctatgatatgggatattttagaaaacgtattaaaaggacatcctatttta
ttaaatagggcgcctacattgcataggttaggaattcaagcttttcagcctaaattaata
gaaggaaaagcaattcaattacatccgttagtatgtgcagcttttaatgctgattttgat
ggagatcaaatggcggttcacttaccattatctcatggagctatattagaagctcaactt
ttaatgttggcttctcaaaatatattaaatcctgctaatggatctcctataacagttcct
tctcaagatatggtattaggattatattacatgactaaaccttttctatcaaattttgaa
aaaaaagtaaaaggagaaaaatttattttttattctccagaagaagttgaaatagcatat
aatcaaggtgtagtagatttacattctgtgataaaagttaaagtatcccttcgtgaaaag
gaaaaatttatttttaaaataatagaaaccactgtaggtagggtattatttaatcaagtt
gtccctaataaagtaggatttattaataaatctcttacgaaaaaatctcttagagagatt
ataggtaaaatattatatctaacagatgtccctacaacagctaatttcctggatgatatt
aaagaattaggtttttataatgcatttaaaggtgggttatcttttgggttaggagatatt
attattcctgataataaaaaagacatggttaataatgctattaaacaagtagataacgta
aaaatgaattataatatgggattaattacaaataatgaacgttataatcaagtaattgat
atatggacaaatactaatgctatgcttacagaaaaagtaatgaaatatatgcgagaagat
aaacaaggatttaattctgtatatatgatgttagattctggggcaagaggttctaaagag
caaatacgtcagctttcaggaatgcgtggtttaatggctaaacctcaaaaagcaggatct
tctggtggggagattattgaaaatcctattttatctaattttagagaaggactttctatt
ttagaatattttatatccactcatggtgctagaaaaggattagcagatactgcattaaaa
actgcagatgctggatatcttacaagacgtttagtagatgcagctcaagatgttattatc
aaaatagaagattgtaaaactttacgaggattagaaatttctgcattaaaaaaaaatgaa
gaaatagtagaaactttatttgatagaattttaggccgtatgtctttaaatgacatttat
aataaagaaaatcaattaataattaatgcaggggaaatgattgatgaaaaaatagcagaa
atcattgataaatctgaaattgaaatagtagaagttagatctcctttaacttgtgaagca
aaaatgggtatatgttctaaatgctatggtcgtaatttatctacaggagaagtcgttaaa
aaaggagaagctgttggagtgattgcagctcaatcaattggagaaccaggaactcagtta
actttacgtacttttcatgtgggtggtacagcaggaaatattacagaatcttcacaaata
aaagcaaaatatgatggaattgtagaatttgaagatttaaaatttgtgaaaacaaaacaa
tattctgataaaatagggatagtagtctctagatcaacagaaatgaaactcttcaactta
aaaaaatcatctattttaatgataaataatattccttatggagcttctttatatgttaaa
catggagatcatttgaaatcgggagacatgatttgcaaatgggatttgtataatgcagtt
attgttgcagaattttctggtgtgatatcttatcaacatttagaacaaggtgttactttt
caagtagaaattgatgaacaaactggattccaagaaaaggtaataacggaaattagaaac
aaaaatttaataccaacattaaaaattattaatgacaaaaatgaagaactaaaagtgtat
aatttaccagtaggttctcatttaatggtagaagacggagaaaaaatagatataggaaaa
atattagttaaggttccaagaaggacagcaaaatcaggagacattacaggaggattacct
cgtttatctgaattgtttgaagctcgtaatccatctaatccagctgtagtatcagaaatg
gatggaatcgtgagtcatggaaaaataaaaagaggaaatagagaaattattgtggaatct
aaaacaggagaaataagaaaatatcttgtaaaactgtccaatcaaatacttgtacaggaa
aacgattatgtaaaagcaggaatgcctttatcagatggagctgttactcctaatgatatt
ctaaatatcagaggacctagggctgtccaagaatatttaataaaagaaatacaagaggtg
tatcgtttgcaaggtgtaaaaattaatgataagcattttgaagttatcgttttacaaatg
atgagaaaggtagaagttatagatgtaggagatactaaatttttggatggaaatatagaa
tataaagatgattttgtagaagaaaatgacagaatttcccaaatgaaagtgattgaagat
ttcggagattctgaaatatttaaaaatggagatattattagttacagagatcttagaaat
gaaaatgcagttttaaaatataaaaataaaaaattaataaaaactagaaatgctattcct
gctacagcaaggccaatattacaaggaataacaagagcagcgttacaaactaaatctttt
atatctgcagcttcatttcaagaaacaacaaaagttttaagtgaagcagctataagtggt
aaaattgattgtttacacggattaaaggaaaatgtaatcgtaggacataaaattcctgca
ggaactggattaagagaatatgaaaacatatttccagatattttgaaataa
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