Bifidobacterium bifidum S17: BBIF_0307
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Entry
BBIF_0307 CDS
T01328
Symbol
clpB
Name
(GenBank) ATP-binding subunit of Clp protease
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
bbi
Bifidobacterium bifidum S17
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bbi03110
]
BBIF_0307 (clpB)
Chaperones and folding catalysts [BR:
bbi03110
]
Heat shock proteins
HSP100
BBIF_0307 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_16
Sigma54_activat
AAA_22
nSTAND3
ATPase_2
TniB
AAA_14
AAA_7
Mg_chelatase
IstB_IS21
AAA_18
AAA_24
bpMoxR
NYD-SP28
AAA_3
NACHT
NBD_SMAX1
T2SSE
Zeta_toxin
ResIII
AAA_19
DNA_pol3_delta2
DUF5403
DUF3435
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ADO52512
LinkDB
All DBs
Position
367123..369786
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AA seq
887 aa
AA seq
DB search
MEQKFTTMAQEVIGDAIQSASAAGNAQVETLHVMDALLRQENGVIQGLIQAAGGNPQAIG
AAVRNALVKMPAASGSTTSQPQASRQLTAALAQAEKEMQQMGDEYVSTEHLLIGIAASAP
NQSADILKANGVTAAALRKAVPGVRGGAKVTSPDAEGSYKALEKYSTDLTARAKEGKLDP
VIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLIS
LDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNML
KPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEA
HHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRKV
TRYEMEEMQLKKAEDPASKERLEKLQNELANTREKLSGLKARWDAEKAGHNKVGDLRAQL
DAKRVEADKFTREGNLAEASKILYGEIPAIQKQLDAAEKADAEDGATGEIKPEPMVPDHV
DADSVAGIVSEWTGIPVGRLMQGENEKLLSMEDYLGKRVIGQKEAIAAVSDAVRRSRAGI
SDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAAP
GYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTVDFKN
TILIMTSNLGSQFLVNQDMDADAKKKAVMDAVHMNFKPEFLNRLDEIVMFHPLTREELGG
IVNIQVAQVASRLTDRRIKLDVTDAAREWLANTGYDPAYGARPLRRLVQTEVGDQLARML
LAGKVHDGDTVLVDQTGGEHLELGTMPEDPDAGSDTDVTVEDVTEDK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaagttcaccaccatggcccaggaagtcatcggtgatgcgattcagagcgcg
tctgccgcgggcaacgcgcaggtcgagacactgcacgtgatggatgcgctgctgcgtcag
gaaaacggcgtgattcagggactgattcaggcggcgggcggcaacccgcaggcgattggc
gccgcggtgcgcaatgctctggtcaagatgccggcggcgagcgggtccaccacatcgcag
ccgcaggcgagccgccagctgacggcggcgctggcacaggccgagaaggagatgcagcag
atgggcgacgagtacgtctccaccgagcacctgctcatcggcatcgccgcatccgcgccg
aaccagagcgcggacatcctcaaggcgaacggcgtgacggccgcggcgctgcgcaaggcc
gtccccggcgtgcgcggcggcgccaaggtcaccagcccggacgctgagggcagctacaag
gcgttggagaagtactccaccgatctgaccgcccgcgccaaggagggtaagctcgacccg
gtgatcgggcgtgatcaggagatccgccgtgtgatccagatcctgagccgccgcaccaag
aacaacccggtgctgatcggcgagcccggcgtcggcaagaccgccgtcgtggagggcctc
gcccagcgtatcgtggccggcgatgtgccgaccacgctgcagaacaaaaagctcatcagc
ctcgatttggggtcgatggttgccggctcgaagtaccgtggcgagttcgaggagcgcctc
aagagcgtgctcaacgaaatcaagaacgccgacggccagatcatcacgttcatcgacgag
attcatacgatcgtcggcgctggcgcggccgaaggctcgatggatgccggcaacatgctc
aagcccatgctggcgcgcggcgagcttcgcctgatcggcgcgaccacgctggacgagtac
cgcgagaacatcgagaaggacccggcgcttgagcgtcgtttccagcaggtgttcgtgggc
gagccgagcgtggaggacacgatcgcgattctgcgtggcctgaagcagcgttacgaggcg
caccacaaggtgacgatcggcgacgacgcgctggtcgccgccgcgacgctctcgaaccgc
tatatttccggccgtcagctgcccgacaaggccatcgatctggtcgatgaggcggccgcg
cacctgcgcatggagctcgactcctccccggaggagatcgacgaactgcagcgcaaggtc
acgcgctacgagatggaggagatgcagctcaagaaggccgaggatccagccagcaaggag
cgcttggagaagctgcagaacgagctcgcgaacactcgcgagaagctgagcggcctcaag
gcccgctgggatgcggagaaggccggccacaacaaggtcggcgacctgcgcgcccagctg
gacgccaagcgcgtcgaggctgacaagttcacccgtgagggcaacttggccgaggcgtcg
aagatcctgtacggcgagattccggcgattcagaagcagctggacgcggccgagaaggcc
gatgcggaagacggcgcgacgggcgagatcaagcccgagccgatggtgcccgaccatgtg
gacgccgattcggtggccggcatcgtctccgagtggaccggcatccccgtcggtcgcctg
atgcagggcgagaacgagaagctgctgagcatggaggactacctcggcaagcgcgtgatc
ggccagaaggaagcgatcgcggcggtgagcgacgcggtgcgtcgttcacgcgccggcatc
agcgacccgaaccgtccgaccggctcgttcctgttcctcggccccaccggcgtgggcaag
accgagctcgccaaggcgctcgccgacttcctgttcgacgacgagaaggccatggtccgc
atcgatatgtcggagtacatggagaaggcgtctgtgagccgtctgatcggcgccgcgccc
ggctacatcggctatgaggaaggcggccagctgaccgaggccgtgcgtcgtcgtccgtac
tcggtggtgctgttcgacgaagtcgagaaagctaaccccgaagtcttcgacgtgctgctg
caggtgctggacgacgggcgtctgaccgacggccaaggccggactgtggacttcaagaac
acgatcctgatcatgacctcgaacctcggctcgcagttcctggtgaaccaggacatggac
gcggacgccaagaagaaggccgtgatggacgcggtgcacatgaacttcaagccggagttc
ctgaaccgtctggacgagatcgtgatgttccatccgctgacccgtgaggagctgggcggc
atcgtcaacatccaggtcgctcaggtggcctcgcgtctgacggatcgccgcatcaagctc
gacgtcaccgacgcggctcgcgaatggctcgccaacaccggctatgacccggcgtacggc
gctcgtccgctgcgccgtctggtgcagaccgaggtcggcgaccagctggcgcgcatgctg
ctcgccggcaaggtacacgacggcgacaccgtgctcgtcgaccagaccggtggcgagcat
ctggaactcggtaccatgcccgaggatccggatgccggatccgataccgacgtcacggtc
gaagacgtcaccgaagacaagtga
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