Bifidobacterium bifidum S17: BBIF_0380
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Entry
BBIF_0380 CDS
T01328
Symbol
rnhB
Name
(GenBank) Ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBIF_0380 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbi03032
]
BBIF_0380 (rnhB)
Enzymes [BR:
bbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
BBIF_0380 (rnhB)
DNA replication proteins [BR:
bbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
BBIF_0380 (rnhB)
Elongation factors (archaeal)
BBIF_0380 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
YidB
DUF5894
Motif
Other DBs
NCBI-ProteinID:
ADO52585
LinkDB
All DBs
Position
451427..452128
Genome browser
AA seq
233 aa
AA seq
DB search
MAMIEHPTLDMERQLAAQGCDVVIGCDEVGRGALAGPVMVGAAAMWSRDLAAAQVPAGVA
DSKLLTEHRREGIVDELRSWCAAYAVGQASNAEIDEWGISHALGIAALRALNDVERQLGM
DGPAGSGRRVDVILDGPNDYITKTMNTFDAPALPIPVQVSCKVKGDRHCATVSCAAVIAK
VTRDHLMVDIAQGNPRYAPYGWAHNKGYGSAAHRDAIARLGVTPLHRVTWHLT
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatcgaacatccaacgcttgatatggagcggcagcttgccgcccaaggctgc
gatgtggtgatcggctgcgatgaggtcgggcgcggggcgctggccggtccggtcatggtc
ggggcggccgccatgtggtcacgtgacctcgccgccgcgcaagtgccggccggtgtcgcc
gattccaaattgctgaccgagcacaggcgcgaaggaatcgtcgacgagttgcgttcgtgg
tgcgccgcttacgcggtaggtcaggcgagtaacgccgaaatcgacgaatggggcatatcg
catgcgttgggcatcgccgccttgcgggcgctcaacgatgtggagcggcagctcggcatg
gacgggccggccggttcgggtcgtcgcgtggacgtcatcctggacggtccgaacgattac
attaccaagacgatgaacacgtttgacgcgccggcgttgccgattccggtacaggtgtcg
tgcaaggtcaagggcgaccgtcattgtgcgaccgtctcctgcgcggcggtcatcgcgaag
gtgacgagggaccacctgatggttgacatcgcgcagggcaatccgcggtacgcaccgtac
ggctgggcgcacaacaagggatacggctcggcggctcaccgcgacgccatcgcccgtctg
ggagtcacgccgctgcatcgggtcacgtggcatctgacctga
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