KEGG   Bombus bifarius (two-form bumblebee): 117210687
Entry
117210687         CDS       T07537                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
bbif  Bombus bifarius (two-form bumblebee)
Pathway
bbif03030  DNA replication
bbif03410  Base excision repair
bbif03420  Nucleotide excision repair
bbif03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bbif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117210687
   03410 Base excision repair
    117210687
   03420 Nucleotide excision repair
    117210687
   03430 Mismatch repair
    117210687
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbif03032]
    117210687
   03036 Chromosome and associated proteins [BR:bbif03036]
    117210687
   03400 DNA repair and recombination proteins [BR:bbif03400]
    117210687
DNA replication proteins [BR:bbif03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    117210687
  DNA Replication Termination Factors
   ELG1-RFC complex
    117210687
Chromosome and associated proteins [BR:bbif03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    117210687
DNA repair and recombination proteins [BR:bbif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     117210687
  Check point factors
   HRAD17(Rad24)-RFC complex
    117210687
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 Rad17 AAA_16 AAA_24 Mg_chelatase Viral_helicase1 AAA_11 AAA_18 AAA_19 RuvB_N nSTAND3 AAA_assoc_2 DEAD AAA_5 AAA_28 NTPase_1 ABC_tran MeaB AAA_23 DUF2247 RNA_helicase AAA_3 MipZ SRP54 AAA_25 AAA_2 AAA_29 AAA_30
Other DBs
NCBI-GeneID: 117210687
NCBI-ProteinID: XP_033309835
UniProt: A0A6P8N5D1
LinkDB
Position
Unknown
AA seq 351 aa
MGVENIVGEPMNIEAVPSTSGYNIKNKEKDKKSANLPWIEKYRPQIFSDIVGNEDTVSRL
SVFAEHGNCPNIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERGIDVVRNKI
KMFAQKRVNLAKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNTSEKIIEP
IQSRCAMLRYGKLSDAQILAKIIEVCQKEDVSHTDDGLEAIVFTAQGDMRQALNNLQSTY
NGFGHVNSDNVFKVCDEPHPLLLKEMLELCAQGKISKAYGIMEHLWKMGYSAEDLISNIF
RVCTNLSIEEPLKLDFIKEIGITHLGIVDGINSLLQMNSLLARLCQRTMQK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggagttgagaatattgtcggtgaacctatgaatattgaagctgtgccatcgacgagt
ggttataatataaaaaataaagagaaagataagaaatcggccaatttgccatggattgaa
aagtatcgaccacaaatattttctgacattgttggtaatgaagacacagtatccagatta
tcggtatttgctgaacatgggaactgtcctaatattatcattgctggtccaccgggagtt
ggtaaaactacaactatattatgtttggcacgtattttattaggaccagcgtttaaggaa
gcagtattagaattaaatgcgtcaaatgagagaggaatagatgttgtcagaaataaaatt
aaaatgtttgcccaaaagagggtaaatttggcaaaaggaaaacacaaaataataattctg
gatgaagctgatagcatgactgatggtgcgcaacaagcattacgtaggacaatggaaata
tatagcaatacaactaggtttgcactagcttgtaatacaagtgaaaaaattatcgagcca
atacagtcacgctgtgccatgttaagatatggaaaattatcagatgcgcaaattttagca
aagattattgaagtttgtcagaaagaagatgtttcacatacagatgatggtttagaagca
atagtatttactgcacagggtgatatgagacaggctctaaataatttacaatcaacttat
aatggttttggacatgtaaacagtgacaatgtttttaaagtctgtgacgaaccacatcca
ttacttcttaaagaaatgttggaattatgtgcacagggtaaaatttccaaagcatatggg
ataatggaacatttatggaaaatgggatattctgcagaagatttgatcagtaatatattc
agagtttgtacaaatctatccatcgaagaaccattaaaattagattttataaaagagatt
ggaataactcatctaggaatagtggatggaattaatagtttactacaaatgaacagtctt
cttgctagactttgtcaaagaactatgcagaaataa

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