Babesia bigemina: BBBOND_0104770
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Entry
BBBOND_0104770 CDS
T08062
Name
(RefSeq) hypothetical protein, conserved
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bbig
Babesia bigemina
Pathway
bbig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBBOND_0104770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0104770
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BBBOND_0104770
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BBBOND_0104770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
Motif
Other DBs
NCBI-GeneID:
24562709
NCBI-ProteinID:
XP_012766354
UniProt:
A0A061D0G9
LinkDB
All DBs
Position
I:complement(1070583..1077434)
Genome browser
AA seq
2283 aa
AA seq
DB search
MTHGGQKVQATHTGQVRQDVSTCVSPQTKERLIAICPSSRQAAVNQLLQDAPEKITCKEF
VQCIDGVYNEISQVTNAGAEASASEADIADTVLSALAPTGSEISELATLIYIAVYTSREA
LRTCAEQKLFHCVFDLDADLKQLPKVGCARLFVMLLMRTKNLLVSTNVRDIESRINDAAA
VAIELLARDEETPPFGKKDKSDIFSNITNLKLETRSMKKLLNKAQWEVLCTELRFYAPQP
PPKQLPKFVSSLRRACEYVAFNTDMDEQADYVHLITRNYLNTKFQVDLLLHFIENLTSQH
HVNTTHRNHREHFEKVFPSDRSDSKALVDSVAWIIDTDVLCRLLALLYNKLHIAQFKGLI
QQLLKDASQSENGHIFPKAIMYALTTLWIRDHDLGDREDVVEVRLATLNPLFWYCYELCL
QQFISSEELIKEIRQLGGESIHGKKSAKLFEFIRELAQSLRGEYVILAIMEVMRYVKYNV
HVLAFMMNLFHAILLDVFKRTQVNFSKGVLEIVCFCRQTFDWGFMTMLIYSVDAIMSSEL
GSTNEYTSRKDVAKDILAGGFIDYLRWKIQQMREFSPHGDVAQKIFIPSCNVVAELFCIL
NHTIGTCDELLDLFQTYDMEYNALSHYNVLLMPLYKALEVRANSEVCDTEDTVNAAPAHS
PVAQSVDGKETTGDAKSLEGDVYKYLMLNEDMDVTTSHVVDIIMACKRHQNVLNAVSLLN
ADSESLRSQTILDVLLRKYINRLVAVLNLSVPADFCLHAAPASDEEGLGLAPRLAMLAKF
TGELFKTHLGPTQCDSVYIMFRIIMEAFRRNKGFLLEFAVEAFCSMGNVLCYPAFARLII
SEEKFCKLYPQFVSQVRNALNDVESEIFEINPDRIGSMVLEETRCLKNIVDTKGRGNTGL
MIVKQSSVSGHELEMDSDSGNIAPSSASMVFSIVNLAANVQYKPVVMDTTWYQDQISLNT
NNISLDDLLALLNIDFQAPTNALEIMSIMEISLSNKNFITHVEQLVTKGYVDWLLFVIYR
YVLMRGYTHFRDCIVFMATLGGTRMVDAMVRFTAHCVNIFLKYLRSFRANTVYRKLLSVS
CGWLGAITLGRNKPLLTKHLDLKCLIIYAYQNGLLAVVLPAVCKLLLNIKSSKIFKLPNP
WTSSLLNLLADINMSSGLKSTLQFDLSLLFKNLDFVPGPRSVHSVVKEVPISDLDRSPKL
GSSIWSTIASNAVGLSMLKSQLDFQVPPVTQEVRTLLQRKIVLNPKVSCLNAKWPWVEMI
LSSIESCYLESSELIKRTMMTCISTTRSIFITDFATRKRELMEINPEILKMSTTAMATGL
TTSLIMANGREQLSNLMSLRLHMQILSVLSMEPPTGDNTLTNSLEQVSGCLAKDNLGLVC
ALVEQATLELITGFISASIGEWIAAIGKESMHMPHDQMIGPPASSGLEAYKRFGSLVPFT
MTRLQKEKQHGSPQQGPYGGPMSSQVPNLNLGPCSPPSTDLTSSLYGLTPRGLIPGYRLP
DFMIIPPIDNLPTSLISCKVDEFEHRIKEAAKHILMHPPTIPLLNSKYMYTTDSSTLLLL
SCLPRNHTVFTLLWSMDYMFQHAANQAECVEALIKKVLKTSKENTKGLDVVSIMQEVEYS
LLEMLSVGCPLLIEIVTNLIPTLGPSRLCQFVRHRILKIPTVDRFISTGMDTETLCRTLH
KLILDGQWLAAGDLPMSMNKLASLDPTGVVTIHLSAGPVTMEYGELHRRLVSHSALTTFS
PELDNRGFMAHYATGKERMMGPGMMSVTGVSGLTLQPGIHTGTSMSAGLRSGNQELRLRS
LRQLVLDKSIIRNKMVIKLCEIPGKERYLQVFKEYLIMESDPAPFFQNFNEHPPDAFLTC
TLLCALQMTFEPQGTEMKSDRLPQNCHDSPVWTFCDGWSTMVAGLSRNESFMLHKALHLM
LGMMQHGVALICFERMLIGLINELENDLVPLISIGHFLTLCGPSEVPEFGSYWINIITRK
QFVQQIIQNPNEWPLYHHLLVEALTSPHSKTPCISFILVTLMQKVPEFLCGYYLSLCDVV
PPRAMQLRNLLTSAVPRSLKLPNPISMDDHMDIPSLNFTNHIITVVKAGGLKVATDMFVH
EPSEALLPMVMKELKLTDPNTFDVMLANHYVLYLISTLPMMLKKIPTTSHRSQNSLLLLE
KLMMNCIPQARHMLLSCMTNHLRYPNVSTFAFVAFMLRLFKNGDQPMQEQITLAILERLL
ISRPHPWGVLHLLFQLVKDPKYDFWNRIQAAPEVEKHIRRIIQSCLNTKHGPHKHSSLSE
LVN
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatggaggacaaaaggtccaagccacacatactggccaagtgcgtcaggatgtc
agcacatgcgtgtctccccagacgaaggaacggctgatcgccatctgcccatcctcgagg
caggctgcggtgaaccaacttctacaggatgcgccggaaaaaatcacctgcaaggagttt
gttcagtgcatagatggggtatacaatgagatatcgcaagttacaaatgccggcgcggag
gcttcggcctccgaggcggatatcgcagacaccgtgttatcggctctcgcgcctacgggg
agtgaaatcagtgagttggcaaccctcatttacatcgcagtatacacttcccgtgaggct
ttgcgcacgtgtgccgaacagaagctgttccactgcgtattcgatctcgatgcggatctg
aagcagctgccgaaggtgggatgcgcacggctgttcgtcatgctgctaatgaggacgaaa
aacctactggtcagtaccaacgtgagggacattgagtcgcgcatcaacgacgctgcggcc
gtggccatagagctgctggcgcgcgatgaggagacgcctccttttgggaagaaggacaaa
agtgacatcttcagcaacatcacgaatctgaaactggagactcggagtatgaagaagttg
ctcaataaggcacaatgggaggtcctttgcacagagcttcgcttctatgcgccgcaaccc
cctcccaagcagctccccaaatttgtgagcagcctcagacgcgcgtgtgaatacgtcgcg
ttcaatactgacatggatgagcaggcagattacgtgcatctgataactcgaaactatcta
aacacgaagttccaggtggatctgctgctccacttcatcgagaacctcacatcgcaacac
cacgtgaatacgacgcaccgtaatcaccgagagcacttcgaaaaggtttttccgagtgac
aggagtgatagtaaggcgctggtcgattccgtggcctggattatcgacaccgacgtgttg
tgccggttgctcgcgctgctgtacaacaagctgcacattgcacagtttaaggggctgatt
caacagctgttgaaggacgcgagtcagtctgaaaatggtcacatcttcccgaaggccata
atgtacgcgctcaccactttgtggataagagatcacgacctgggcgatcgagaagatgtc
gtagaggtcagacttgccacgctcaaccctcttttctggtattgctatgaactgtgtctg
cagcagttcatttccagtgaggaactcataaaggaaatacggcaacttggaggagaatcc
atacacgggaagaagtctgctaaactcttcgagttcatacgcgaattggctcaatcactt
cggggcgagtacgtcatactggccatcatggaagtgatgcggtatgtgaagtataacgtg
catgtgctggcgttcatgatgaacctcttccatgcgatactgctcgatgtgttcaaacgc
acacaagtcaacttcagcaagggtgttctggaaatcgtctgcttttgccggcaaaccttc
gattgggggttcatgacgatgctaatttatagtgtggatgctataatgagctcagagttg
gggtctacaaacgaatacaccagccgaaaagatgtggcaaaggatatcctggcgggaggg
tttattgattacctgcgctggaagatacagcagatgcgagaattctcgcctcatggtgac
gttgcgcaaaaaatatttataccgagctgcaacgttgttgccgaactgttctgcatactg
aaccacacgataggaacttgcgacgaactcctggacctgttccagacatacgacatggag
tacaatgcgctgagccattacaatgtgctgttgatgccgctctataaagcgctggaagtt
cgggcgaattccgaagtctgtgatacagaggacacggtcaatgcagcgccggcacactcg
ccagtcgcacaatcggtcgacggcaaggagacgacgggagacgctaaaagtctagagggg
gacgtatacaagtacctgatgctcaacgaggatatggatgttactacttcgcatgttgtt
gacataattatggcatgcaagcggcatcaaaacgtccttaatgcagtgtctttactcaat
gccgactccgagtcgctccgatcgcaaaccatacttgatgtgctgctgaggaaatatatc
aacaggcttgtggcggtgctcaacctctcggttcctgccgatttctgccttcatgctgcg
ccggcgtccgacgaggagggcttgggactagcgccccggctcgccatgctggcgaaattc
accggcgaactcttcaaaacgcatcttggcccaacgcaatgcgactccgtgtacattatg
tttcgcattataatggaagctttcagacgcaacaaggggttcttactggagtttgccgtc
gaggccttctgctcaatgggaaacgtcctctgctacccagcattcgccaggcttataatt
agcgaagagaagttttgcaagctgtatccgcaatttgtttcacaagtgaggaatgcgctc
aacgatgtagagtcagagatcttcgagatcaacccggacagaattggttccatggttctc
gaggaaacgcgttgcttaaagaacatcgtagatacaaaggggcgcggaaatacgggtctg
atgattgtcaagcaatcctcggtctcagggcacgaactggaaatggattccgacagcggc
aacattgcgccaagcagcgcgagcatggtcttctccatcgtcaacctcgcggcaaatgtg
cagtacaaaccggttgtcatggacaccacgtggtaccaagatcaaatttcgttgaacacc
aacaacatatcactggatgacctgttggcgttactcaacatcgacttccaagcgcccaca
aatgcgcttgaaatcatgtccatcatggaaatatccttgagcaacaaaaacttcattacg
cacgtagagcagctcgtcaccaagggatacgtcgactggctgctattcgtcatatacagg
tacgtgctcatgcggggctatacccacttccgcgattgcatcgtatttatggccacgttg
ggcggaacgcgtatggtggacgcgatggtgcgattcacggcgcactgcgtcaacatattt
ctcaagtaccttcggtcgttcagagcaaacaccgtatatcgcaaactgttgagcgtcagc
tgcgggtggttgggggcgattactctgggacgtaacaaaccgctacttaccaaacatctg
gacctcaagtgcctcatcatttacgcctaccagaacggtctgctggctgtggtactgccg
gcggtatgcaagctcctgctgaacattaagtcgtcgaagatatttaaacttccaaacccg
tggacgagctcactgctcaatttgctggcagatattaacatgtctagtggactaaaatcc
acactccagttcgacttatcgctgctcttcaagaacctcgacttcgtgcccggaccgagg
tccgtgcacagtgtagttaaggaagtgcccatctccgatttggatcgcagcccgaagcta
ggaagcagcatatggtctacaatcgcttcgaacgcagtggggttgagcatgctgaaatcg
cagctagattttcaggtgccgcctgtcacacaagaggtcagaacgctgctccagaggaaa
atagtgctcaaccccaaggtgtcatgtttgaacgcgaaatggccatgggtggaaatgata
ctaagctccatcgagtcctgctatttggaatcatctgaactcattaaacgaacgatgatg
acgtgcatatccactacgaggagcatattcattaccgattttgccaccaggaagcgtgaa
ctcatggaaatcaacccagaaatattgaaaatgagcacgacggcaatggccacaggactg
accacgagcttgattatggcaaacggcagagaacagctgtccaacctgatgagcctcagg
ctgcatatgcagatactatcggtcctatccatggaacccccaactggggacaacacgctc
acaaacagtctcgaacaagtgagtgggtgccttgccaaggataacctagggctcgtttgt
gcactggttgaacaggccacgcttgagctcataacgggcttcatttcggcttctatcggc
gagtggattgctgctatcgggaaggagagcatgcatatgcctcatgatcaaatgatcggt
ccaccggctagtagcggtttggaggcttacaagagatttgggagtttggtgcccttcacg
atgacacgcttgcaaaaagaaaagcagcatgggtcgccgcagcaggggccatatgggggc
ccaatgagcagccaagttccgaatctcaaccttggcccttgcagccccccgagcacagat
cttacgagttccttgtacgggttgacccctagggggttgattcctgggtacagactaccg
gattttatgattataccgcctatagataacctgccgacgtcgcttatatcgtgtaaagtc
gatgaattcgaacaccggattaaggaagctgcgaagcatatcttgatgcaccctcctaca
ataccgctgcttaatagcaaatacatgtacacaacggactcttcaacgttgttgctgctg
tcgtgtctcccgcgaaaccacacggtgttcacgttgctctggtcgatggattacatgttc
cagcacgcggcaaaccaggccgaatgtgtggaagcgctcatcaaaaaggtgttgaaaacg
tccaaggaaaacacgaaggggctcgatgttgtctctattatgcaggaggtcgagtactcg
ctgctagagatgcttagtgttgggtgcccactgctgatagaaatagtcaccaacctaatt
ccaacactggggccttccaggttgtgccagtttgtcaggcacaggatactcaagattcca
actgttgataggttcatcagcactggcatggatactgaaaccctatgccgaacgctgcat
aagctcatactggacggtcagtggctagcagctggtgaccttccgatgagcatgaacaaa
ctggcatctctcgatcccacaggtgtggtaactatccacttgtcagcaggccccgttacg
atggaatacggtgaattgcatcgcagattggtgtcgcattctgcgctcacaacctttagc
ccggagttggataataggggctttatggcgcattacgcaaccgggaaggaacgaatgatg
ggaccaggcatgatgtctgttaccggggtttccggattaacattgcagcctggcattcac
accgggacgagtatgtctgcagggcttcgatctggtaatcaggaattgcgtttgcgctca
ctacggcagctggttctcgataagtcgatcatcagaaacaagatggtcattaaactgtgt
gaaatcccggggaaggaaaggtaccttcaggtgttcaaggaatacttgatcatggaaagc
gacccagcgccattctttcagaatttcaacgagcaccctcccgacgccttccttacctgc
actctcctgtgcgctctgcaaatgacgttcgaaccccaaggcacagaaatgaagagcgac
cggctcccgcaaaactgccacgactcgcccgtatggaccttctgtgacgggtggtccacc
atggtggctggactatcgcgtaatgagagtttcatgctgcacaaagcgctgcaccttatg
ctggggatgatgcaacacggggtggccctaatatgtttcgaaaggatgttgattgggttg
atcaatgagctggagaacgatctggtaccgcttatatcaatcgggcacttcctcaccctc
tgcgggccgtcagaagtacctgaatttggctcgtactggatcaacatcatcacccgtaaa
cagttcgtgcagcagatcatacagaacccgaacgaatggcccctgtatcaccacctgctt
gtagaggcgctaacatcgccgcactccaagacgccgtgtatcagcttcatactggtcacg
ctcatgcagaaggtgcccgaattcctatgcgggtattatctgagcttgtgcgacgtggtg
cctccacgggcgatgcagctgcgaaacctcctcacgtccgccgtgccccggagtctgaaa
ctacccaaccccatcagtatggacgaccatatggacataccgtcgctcaacttcacgaac
cacatcatcactgttgtgaaagcgggtggcctaaaagttgcaacggacatgttcgtccat
gaacctagcgaggcgttgttgccgatggtgatgaaggagctcaaattaacggaccccaac
acgtttgacgtcatgctggcgaatcactacgtgctgtatctcatcagcacgctgccgatg
atgctaaagaagatacccacgacgagtcatcgatcccagaacagccttctcctgctcgaa
aagttgatgatgaactgcattccgcaggcaaggcatatgctgctcagttgcatgacaaac
catctgcgctacccgaacgtatctacgttcgcctttgtcgcattcatgctcaggttattc
aaaaacggcgaccagccgatgcaggagcagatcaccctcgcgatccttgagcgactgctc
atcagccgaccgcacccttggggagtgttacatctgctcttccagctggtcaaggacccg
aaatacgacttctggaatcgcatacaggcggcccccgaggtggaaaagcacattcgcaga
atcatacagagctgcctgaacacgaagcatgggccgcacaagcatagcagcttgagcgaa
ctcgtcaattag
DBGET
integrated database retrieval system
