Babesia bigemina: BBBOND_0403620
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Entry
BBBOND_0403620 CDS
T08062
Name
(RefSeq) DEAD/DEAH box helicase, putative
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
bbig
Babesia bigemina
Pathway
bbig03013
Nucleocytoplasmic transport
bbig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
BBBOND_0403620
03015 mRNA surveillance pathway
BBBOND_0403620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0403620
Enzymes [BR:
bbig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBBOND_0403620
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
BBBOND_0403620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Beta-ketacyl_N
Cas_Csy1
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
24566415
NCBI-ProteinID:
XP_012770060
UniProt:
A0A061DE15
LinkDB
All DBs
Position
IV:788540..790199
Genome browser
AA seq
465 aa
AA seq
DB search
MTPEKSPEPTVTEPEEKENVTKQPSQVETAVEIEQQKPKHYHLDEIQDAIKVNGVYAEEQ
DLEWTDLMLSPSLLRGVQHKGFIKPSRIQQIALPLITNSSTNLIAQAKNGSGKTATFSLA
LLSCVNENMPAIQGVCLCPTRELAVQNVQVLAQLGKFTRIKYFIGVPQCVPYGRGEEYHI
YVGTPGKTLEFIRKRTIDFQNTRMIVLDEADELVNPDNNMGPQVMQFRLSFRHPVQILLF
SATFSEEVQKFAQRMAPDANMIQVKRQQLTLDCIQQHYMVCSDDDDKFNKLCELYASMII
GQSVIFVNSRNTAFDVSLKMREQGHAVSLLCGSMSKQAGSNSMGPEIRDRIMREFKDGET
KVLICTDVLARGIDVPQVTLVVNYELPFLYSGSARFSRDRKIAMETYLHRIGRTGRFGAK
GMAINMINPNEMYLIDSIKEYYECNIEPLECDPESIEDLLRNIRS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacaccagaaaaatctccggaaccgacggtaaccgagccggaggaaaaggagaatgtc
acaaaacagccgtcacaagtggaaacagccgtggagatcgaacagcaaaagccgaaacac
tatcacctcgacgagatacaggatgctatcaaggtcaacggtgtatatgcggaggagcag
gacctggaatggaccgacctcatgctctcgccctcgctgctcagaggtgtgcagcataag
gggttcatcaagccttcgcgcatccagcaaattgcactgcccctcataacgaacagcagc
accaaccttatagcgcaggccaaaaatggctcgggaaaaaccgccacattctcccttgcg
ttgctctcctgtgtaaatgaaaatatgccagcgatccagggggtctgtctttgtccaacg
agggagctcgccgtgcaaaacgtgcaagtgctggcgcaactggggaaattcacgcggata
aagtatttcataggcgtaccgcagtgtgtcccgtatggtcgtggcgaggagtaccacatt
tacgtcggaaccccgggaaagacactggagttcattcggaaacgcaccatcgatttccag
aacacgcggatgatcgtcctggacgaagcagacgagcttgtcaacccagataacaacatg
ggaccacaggtcatgcagtttaggctttctttcaggcaccctgtgcaaattctgctcttc
tcagccaccttctcggaagaggtgcaaaagttcgcacaacgcatggcgccagacgccaat
atgattcaggttaaacgccaacagctgaccctggattgcattcagcagcactacatggtc
tgctctgacgacgatgacaaattcaacaaactctgcgagttgtatgcgagcatgatcatc
ggacagtcggtcattttcgtgaattccaggaacacggcgttcgacgtctcgctcaagatg
cgcgaacaaggccacgccgtgtcgctgctttgcggctccatgtctaaacaagcagggagc
aactcgatggggccggaaatcagggaccgcatcatgcgcgaattcaaggatggagaaacg
aaggtgctcatttgcacggacgtgctggcccgtggtatcgacgtgccgcaagtcacgctg
gttgtcaactacgagctgcctttcctctactcagggtcggcgcgattctccagggacagg
aagattgctatggaaacctacctgcacagaatcggaaggactggtcgctttggcgccaag
ggaatggccatcaatatgatcaacccgaacgaaatgtacctgatagattccatcaaagag
tactacgagtgcaacattgagcctctggagtgcgacccggagtcgatagaagacttgctg
cgcaatatacggtcgtaa
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