Bison bison bison (American bison): 104994833
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Entry
104994833 CDS
T08726
Symbol
COL9A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04151
PI3K-Akt signaling pathway
bbis04510
Focal adhesion
bbis04512
ECM-receptor interaction
bbis04820
Cytoskeleton in muscle cells
bbis04974
Protein digestion and absorption
bbis05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
104994833 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104994833 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104994833 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104994833 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
104994833 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
104994833 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbis00535
]
104994833 (COL9A1)
Proteoglycans [BR:
bbis00535
]
Extracellular matrix (ECM) proteoglycans
Others
104994833 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
DUF4882
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
104994833
NCBI-ProteinID:
XP_010846803
Ensembl:
ENSBBBG00000017784
UniProt:
A0A6P3HW51
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MKSLWKIPVLFFVCSFLGTWASVTVKRRPRFPVNSNSNGENELCPKVRIGQDDLPGFDLI
SQFQIDKAASRRAIQRVVGSTALQVAYKLGNNVDFRIPTRHLYPNGLPEEYSFLTTFRMT
GSTLEKHWSIWQIQDSSGKEQVGVKINGQTKSVSFSYKGLDGSLQTAAFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIESLPIKPRGQIDVDGFAVLGKLVDNPQVSVPFELQWMLI
HCDPLRPRRETCNELPARITVSPXTSQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPPGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGPRGFPGRGIP
GPPGPPGGAGLPGELGRVGPIGDPGKRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGGLGEVGAQGPPGAQGLRGITGVAGEK
GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSPGIPGLPGPKGDTGLP
GVDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGLPGAKGVAGEKGNTGAPGKPGQL
GNSGKPGRQGPPGEVGPRGPRGLSGSRGEVGPVGPPGPPGKLGSLGSPGLPGLPGPPGLP
GMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGVRGPEGSR
GLPGEEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVIQEHFAQMAAS
LKRPDSGASGLPGLPGPPGPPGPPGENGFPGQMGLRGLPGMKGPPGALGVRGPKGDAGER
GDRGPPGRGPKGLPGAPGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGF
CEPASCTLQAGQRAFNSKGPNQ
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcttatggaaaattccagttctcttctttgtatgcagtttcctggggacctgg
gcatcagtgactgtcaagcgtcgtccaaggttccctgttaattcaaattccaatggtgaa
aatgaactctgcccaaaggtcaggattggacaagatgatttaccaggatttgacttgatt
tctcagttccagatagataaagcagcatccagaagggctatccagagggtagttggatca
actgccttacaggtggcttacaagttgggaaataatgtagacttcaggattccaaccagg
catttatatcccaatgggctgcctgaagaatactcctttctaaccacttttcggatgact
ggaagcacacttgaaaagcactggagcatttggcagattcaggattcctcagggaaggag
caagttggcgtgaagattaatggccaaacaaaatctgtttcattttcatacaaggggctg
gatggaagtctccaaactgcagccttttcgaatttgccctccttgttcgattcccagtgg
cataagatcatgattggcgtggaaaggagcagtgcgactcttttcgttgactgcaacagg
attgagtccttacctataaagccaagaggtcaaatcgatgtcgatggctttgctgtgctg
ggaaaactcgtggataatcctcaagtttctgttccgtttgaacttcaatggatgctgatc
cattgtgaccccctgcgacccaggagagaaacttgcaatgagctgccagccaggatcacg
gtgagtccctagactagtcagaggggccccccaggtgagcagggtcctccggggccgccg
ggtccccctggagtcccgggcatcgacggcatcgacggtgatcgcggtccgaagggtccc
ccgggccccccgggtccccctggagagccggggaaaccaggagctccaggcaagcctggc
acaccgggtgctgacggattaacaggtcctgatggatcccctggctctgttggaccaaga
ggacaaaaaggagaacctggtgtgccaggacctcgtggatttccaggtcgtggtattcct
ggaccccctggtcctcctgggggagcaggactccctggagagcttggccgtgtgggaccg
attggcgaccctgggaaaagaggaccaccgggcccccctggccctccgggacccagtgga
acaattggctttcatgatggagatccattgtgtcccaattcctgcccaccgggtcgttcg
ggatacccaggtctgccaggcatgaggggtcataaaggagctaaaggagagattggtgaa
cctggaagacaaggtcacaagggtgaagaaggggaccagggtggactgggagaagttgga
gctcaaggacctccgggagctcaaggtttgagaggcatcaccggcgtagctggcgagaaa
ggggaaaagggtgctcggggcttagatggagaacctgggcctcaagggctccctggtgca
cctggtgaccaaggacagcgaggacctccaggagaaataggtcccaagggagacagaggg
ccgcaaggttctccaggaattcctggtctccctgggcccaaaggggacacgggcctgcca
ggtgtggatggccgtgacgggatacctggaatgccgggaacaaagggggaaccagggaaa
cccgggcctcctggtgaagcaggtttgcaggggttacctggtatacctggacttcctggt
gcaaaaggtgttgctggtgaaaagggtaacacaggtgctccagggaagcctggtcaattg
gggaattctggcaaaccgggccgccaggggccgcccggagaagtgggacccagaggaccc
cggggcctttctggcagcagaggtgaagtaggaccagtgggacccccagggccaccgggt
aaactgggttctcttggcagccccggcctccctggcttgcctggcccccctggacttcct
gggatgaaaggtgacaggggtgtagttggtgaacctggtccaaagggtgaacagggcgcc
tctggtgaagagggtgaagctggagaaaggggtgaactcggagatataggattacctggc
ccaaagggatctgcggggaaccctggggagcctggcgtgaggggacccgaaggcagccgg
gggcttcctggagaggaaggaccccgaggcccgcccggcccacgcggcgtgcagggggag
cagggcgccaccggcctgcccgggatccagggccccccgggcagagcaccgactgatcag
cacatcaagcaggtttgcatgagagtcatacaagagcactttgctcagatggctgcgagt
ctgaagcgtccggactccggagcctcgggcctccctggactgcctggaccccctggcccc
ccgggtccccctggagagaatggctttccaggccagatgggactccgcggcctcccgggc
atgaagggtccccctggtgctctcggtgtgaggggccctaaaggtgatgcaggagaaaga
ggggatcgtggccccccaggaagaggtcccaaaggtttgccaggagctccgggtctccca
ggtgacccgggtcccgccagctacgggaggaacggccgggacggcgagcgaggcccccct
ggggtggcgggcatccccggtgtgcccggccccccaggccccccgggtccccctggtttc
tgcgagccagcatcctgcaccctgcaggccggtcagcgggcattcaacagcaaaggtccc
aatcagtga
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integrated database retrieval system
