Borreliella burgdorferi N40: BbuN40_0389
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Entry
BbuN40_0389 CDS
T02075
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bbn
Borreliella burgdorferi N40
Pathway
bbn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BbuN40_0389 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbn03021
]
BbuN40_0389 (rpoB)
03400 DNA repair and recombination proteins [BR:
bbn03400
]
BbuN40_0389 (rpoB)
Enzymes [BR:
bbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BbuN40_0389 (rpoB)
Transcription machinery [BR:
bbn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BbuN40_0389 (rpoB)
DNA repair and recombination proteins [BR:
bbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BbuN40_0389 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ADQ29187
LinkDB
All DBs
Position
complement(400518..403985)
Genome browser
AA seq
1155 aa
AA seq
DB search
MIKRVHLGQGRADEILDLPNLIEIQLNSYEKFLQLDKLKSKKPLLNEGLESVFRNIFPIK
SGNGDVALEYERYYIENDALNFTEKECKRKGQSYEAVLKVRLNLQFLTTGEIRQKDVYMG
TIPLMTERGTFIINGAERVVVSQIHRSPGVVFYKEKDLYSARIIPYRGSWLEFEIDSKKD
YLYVKIDRKKRILITLFLRALGFDTREKIIETFYNIKKIKVEDGTKRDLPGQYLAKSINI
RENMYYRAGDKITLQDVEDFLQNGVNEIELVDFDGYDDISGKRFVSSNVILNCLEKEDAF
FALKDGSKELPKESVMLAVYSSLFPGEPISIDNAENDLKTIFFSERRYDLGRVGRYKLSK
KFGFDDLTTSVLTMDDIVNTISHLLRIYEGHDILDDIDHLGNRRVRSVGELLTNIYKGAM
SRVEKIAKDRMSNKEVFNLKPQELISVKPIVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLE
TPYRKVVNGEVTDQLEYLSAIDEEKKCIAQANAAFNSNGKYLEDLVSVRISGDYTTTSPT
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPPIVGTGMESVV
AKDSGVVVKAKRSGEVILATSSKIVVKPFEAENAKDLDEYHIVKYERTNQDTCFNQSVLV
KEGQKVERGEIIADGPATRYGELALGNNLLLGVIPWNGFNYEDAILISDRIVKEDLYTSI
HIKEFSIEVRETKLGPEKVTGDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKS
EGDITPEFRLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLGESYNVPVFESATNEQIQEKLKTAGFNPTSKEILYDGYTGEPFENEV
MVGVIYMLKLHHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAH
TLQELLTVKSDDMSGRVKIYENIVKGVPTNVSGIPESFNVLMQELRGLGLDLSIYDDAGN
QVPLTEKEEELINKS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagagttcatctgggacaaggaagagctgatgagattttagacctacctaac
ctgatagaaatacaattaaattcttatgaaaaatttttacaacttgataaattaaaaagt
aaaaaacctttacttaatgagggccttgagtctgtttttagaaatatatttcccattaaa
agtggaaatggcgatgttgctcttgagtatgaaagatattatatagaaaacgatgccctt
aattttacagaaaaagaatgtaaaagaaagggtcaaagttatgaggctgttttaaaagta
agattgaatttgcaatttttgactactggggaaataaggcaaaaagacgtatacatggga
actattcctttaatgacagaaagaggcacttttattattaatggggctgagagggttgtt
gtttctcagattcacagatctccaggagttgttttttataaagaaaaagatttgtattct
gctagaataattccttatcgtggttcttggttagaatttgagattgattcaaaaaaagat
tatctttatgtaaaaatagatagaaaaaaaagaatacttataactctttttttaagagct
ttagggtttgatacgagagaaaaaataatagaaactttttacaatattaaaaaaattaaa
gttgaagacggtacaaaaagagatcttccagggcaatatttagctaagagtattaacata
agagagaatatgtattatcgtgcaggagataaaattactctgcaagatgttgaagatttt
ttacaaaatggagtaaatgaaatagagcttgttgattttgatggttatgacgatatttct
ggaaagcgctttgtaagttcgaatgttattctaaattgtcttgaaaaagaggatgctttc
tttgctttaaaggatggctctaaagagcttccaaaagaatcagttatgctggctgtttat
agctctctttttcctggtgagccaatatcaattgataatgctgaaaacgatttaaaaacc
atattcttttctgaaagaagatatgatcttggacgtgtggggcggtataaactttctaaa
aaatttggatttgatgatttaacaacatcggttttaactatggatgatattgttaacacc
atatctcatcttttaagaatatatgaaggccatgatattcttgatgatattgaccattta
ggaaatagaagggttcgttctgttggcgagcttcttactaatatatataaaggcgcgatg
tcaagagttgaaaaaattgctaaagatagaatgtctaacaaagaagtttttaatctaaag
cctcaagaattaataagcgttaaacctattgtatctgctgttaaagaattttttgcaacc
agccagctttcacagtttatggatcaggtcaatcctttggctgagcttactcacaaaagg
cgtcttaatgctcttggaccaggaggactttcaagagatagggcaggatttgaagtaaga
gacgtgcattatactcattatggtagaatgtgtcctattgaaactcctgaagggccaaat
attggacttattgtttctttggctacttattccagagttaatgattatggttttttagaa
actccttataggaaagttgttaatggagaggtgactgaccaattagaatatttatctgct
attgacgaagagaaaaagtgtattgctcaggccaatgctgcttttaattctaatggaaag
tatcttgaagatttagtttctgttagaatttctggtgattatactacaacaagtcccaca
aatatagactatatggacgtttctcctaggcagctaatttcagtatcttcggcgttaatt
ccttttcttgagcacaatgatgcaaatcgagcccttatgggttctaatatgcaaagacaa
gcagtacctttgcttttccctaagccccctattgttggtacgggtatggaaagcgttgtt
gcaaaggattcaggagtagttgttaaggctaaaagaagtggggaagttattcttgcaaca
agtagtaagatagttgttaaaccttttgaggcagagaatgctaaagatttagatgaatat
catattgttaagtatgaaaggacaaatcaagacacttgttttaatcaatccgttttagtt
aaagagggtcaaaaagttgaaaggggcgagataatagctgacggtcctgctactagatat
ggagaacttgctcttggtaataatttattgctaggagttattccttggaatggatttaat
tatgaggatgctatattaatttctgatagaattgtaaaggaagatctttatacatctatt
catatcaaagaatttagcatagaggtaagagaaactaaacttggtcctgagaaagttaca
ggagatatacctaatgttagtgaaaagatattaaataaattggatgaaaatgggattata
cggataggaacttatgtaaagcccggtgatattctggttggtaaagttactccaaagtca
gaaggagacattactcctgaatttagactgttaacttccatttttggagaaaaagcaaaa
gatgttaaaaataattcattaaaagttcctcatggtactgaaggtacagttattgatgtt
caaaggattaccaaagaggatgttggtaatctttctcctggagttgaggagatacttaaa
gtttatgttgccaaaaaaaggaagcttaaagagggcgataaaatggctggacgacatggt
aataagggtgttgttgcaaagattcttcctgttgaagatatgccttatcttgcagacgga
acccctcttgatatatgcttaaatcctttgggagttccatctagaatgaatatcggacag
ttaatggaatctcaattaggtcttgctggtaaatatcttggtgaatcttataatgttcct
gtttttgaatctgctacaaatgaacaaattcaggaaaaattaaaaactgctggatttaat
ccaacttctaaagaaattttatatgatggttatacaggagagccgttcgaaaatgaagta
atggttggggtgatttacatgcttaaactacaccatcttgttgatgataaaatgcacgca
agatcaacaggcccatattctcttgtttctcagcaacctcttggaggaaaggctcaattt
ggtgggcaaagacttggagaaatggaggtttgggctcttgaagcttatggtgcggcgcac
acccttcaagaacttttaacagttaaatctgatgatatgtcaggcagagttaaaatatat
gaaaatatagtaaaaggcgttcctactaatgtatcagggattcctgagtcttttaatgtg
ctaatgcaagagcttagagggcttggacttgatttgtcaatttatgatgatgctgggaat
caggttcctttgacagaaaaagaagaagaattgattaataaaagctag
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