Babesia bovis: BBOV_II005530
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Entry
BBOV_II005530 CDS
T01085
Name
(RefSeq) CCR4-Not complex component Not1 family protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bbo
Babesia bovis
Pathway
bbo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBOV_II005530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbo03019
]
BBOV_II005530
Messenger RNA biogenesis [BR:
bbo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BBOV_II005530
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BBOV_II005530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
Motif
Other DBs
NCBI-GeneID:
5478305
NCBI-ProteinID:
XP_001610072
UniProt:
A7AU93
LinkDB
All DBs
Position
2:1246842..1253725
Genome browser
AA seq
2237 aa
AA seq
DB search
MTHVAHKSQLLHTGQPRHYVKSQTVIQAKERLRAISPSSRQAAIRRILEEAPDRITCKEF
IRSLDEIYTELSQDAGINGDTAVPAAEIAEPLLSAIAPTGRDINSVAALIYVVAYTCHEG
FRTYTERRLFPYVLDVDLDVRQFARLGCARLLVMVLLSTTNIFVGAQGPQCERRVNVAAA
VAAELLARDEEAPLPPRKEKNDVFNYVVNMKMEAKNMKRLLNKSQWDALCTDLRIYAAFP
PQKLMSKFVNNLKRICDYVAFNSETESLGDYATLITSTFLNSRFQVELLLNFIESNSSHH
HIQPKHTRRKELFERLIPIRCHEYINTVLWAFDTDVLCMLFSLVQQKHQVIQFKTMMEQL
VKDGSQPENCYLLAKAMIYALTDLWIRDHDPFGNRDDIVKLRLANTNPLFWYTYELCLQQ
FISSEDLINEIRSISGGSIQGKRSNELFEFLGEMAKSLPGEYIILGIMETMRYVQYNIHV
VSFMINLFQGILMDVFKDTKMNFSKGLLEIVCYCRQTFDWGFMTMLIHSVDALMVPEDGI
ANRNDVAKEKLAGGFMDYLRWKMQQIRQSISQGNVTPNVFIPNCNVIAEIFCILNHTIGP
CDELLDIFQAFVSEYKGLGHYKVLLIPLYDALKARAKGDTQRSPKVPIGFDRDLYSYMVH
NEDIQSTTSHIVDIIFSCKLHQSVFDAVASLNADKNSLRTQTILDVLMRKYINRLVMVLN
LSVPNDFCLHVNKNTSEETIGLGTRLAMVAQFTGKLLSLHLMTAHCDSVYIIFRILIEAI
RSTQVFLIEFAVEAFSAMGNLLAFPVFAKVFINEDVIARLYPQFASHVKAALERIDVYIV
EVCNNDSGAVVFEKPQCLKAFDSKARGSKGLMILKQSTTLPYEFDPDHEGAMMHPNNAST
VFSIVNLAANIQYKQLPQDTVWYQDQLTMDLSNLTLDDLLGTLKVEFEAPPNALEIMSIM
EMTLSNKTFTNHVEQLVTKGYVDWLLFVIYRYVLIRGYTYFRDCIVFMATLGGARMMDAM
VKFAAYCLNVFLKYLRVCRSNPIYRKLLTVSSGWMGAITLGRNKPLLTKHLDLKHLILYS
YQNGYLTVIIPAVCKLLMNVKSSKIFRLPNPWTSSLLNLLADIATSSGLKSTLQFDLSLL
FRNLELIPGPRLVNALVKEVPVSDVDRSPKLGSSIWSTCAPPNAPGAQMMPPEFQIQPVT
QEVRELLKRKIVLNPKVSCLNAKWPWIEMILNAIESCYMESSELIKKTMFTCITTTRNIM
ITDFSGCKRDVVDNNPEMLKISATAMASGLATSLIMATSRDQLCSLMALRLHMQILSVLS
MEPVPGHSALTNNLEQVSGFLAKDNLGLVCALVEQATLELITGYVSASINDWIASIGKEP
YANVPTELSIALQSNMGLDTYNRFGALVPFAMTRLQADKHQGSPPHGFGMPGGYGIPQGG
MMNDSVSMMHHTKPRQNAPAFRLPDFMVIPPIDNLPTSLIACKIEEFEHRVKEAAKQILT
HPPTVPLLNSKYLYSADSSTLLLLSCLPRNHALFTLLWSMDYMLQHAASQPECIEAIVGK
VLKTSKETSKGLDVVSIVQEVEYCLLEMLSVGTPLVVDIITNVMPSLGPARLCQFVRHGL
IKLPALDRYISGAMDLETCCRTMHKLVLDTQWVTAADLPISMSKLASMDPNATVQIQIGN
SPVSIEFGELHRRLSTRIPMMPFSGDSDGRNNMGHVPPSTEHTLGYVPPGGGYPVQGAVG
RPGNRNIPDVRLRTMRQLVVDKSLVRNKMVIKLCELPGKERYIKMFQEFLVNADKDSSQL
YQNFNEHPPDAFLTCTLLCALQMTFEPMGTEMKSDRLPQTSHNSPVWHYCDGWSVMAARL
SRSETFMLHKALHVMLGVMQHGLVLICFERILSNLINELESNPLFLVSLANFLTLCGPSE
IPEFGEYWISLVTRKQFLHQVIQSPNEWPLYHHLLVEALTSSHSKNPSISFVLVTLMQKV
PEFLCGYYLSLCDVVPPRAMQLRNLLTCAVPRSFKLPNPIIVTEHVEIPSLNFTNHIITV
LKASGLKVATDMFIHEPNEGLVPVILKELRLTDPSTFDVVLANHYVLYLVNTLPIIRKKM
PGGHQYAQNSLLLLEKVITSCISQARHMLLSCMTNHLRYPNTSTFSFVSFMIRLFVNCEP
PMQEQITLALLERLLISRPHPWGVLHLLFQLVENPKYDFWNRIEAAPEVEKHIRRIIQGC
LTPKAPPQPGAPNEHVR
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atgacacatgtggcgcataaatcgcaactcctacatactggtcagccgcgccattatgta
aaatcgcagacagttatccaggccaaggaacgattaagagctatatcgccttcttccagg
caagcggcaatcaggaggatactcgaagaagcccctgataggataacttgtaaggagttc
attcgaagtttagacgaaatatacaccgaattatcgcaagatgcgggaatcaacggagat
actgcagtaccggccgcagaaattgcggaacccctcttatcagccatcgcacctacagga
agggacataaacagtgtagccgcattgatatacgtagttgcctacacatgccacgaagga
tttaggacgtatactgaacgccgcttgttcccctacgtacttgatgttgacctagatgtt
agacagtttgccagactgggttgtgccaggctgttggtaatggtactacttagcacaact
aatatatttgtcggggcccaggggccacaatgcgaaagaagagtaaacgtagctgcagca
gtggctgcagaactgcttgcacgtgatgaggaagcaccactaccaccgagaaaggaaaag
aacgacgtatttaactatgtagtcaacatgaaaatggaagccaagaacatgaagagactc
ttgaacaaatcgcagtgggatgcattgtgcacggacctgagaatatatgcagcatttcca
ccgcaaaaactaatgagtaagtttgtgaacaatcttaagcgtatttgcgactatgtcgct
ttcaatagcgagactgaatccttgggggactacgccactctgattacctcgactttcctc
aatagtagatttcaagtggagctactgctcaatttcatagagtcaaactcgtcacaccac
catatacaacccaagcatacaagacgaaaggagctatttgaacggctaatacccataaga
tgccacgagtatataaatacagttctatgggcattcgacactgatgttctttgtatgctt
ttctcgctggtacagcagaagcaccaggttatacaatttaaaactatgatggaacagttg
gttaaagatggaagccaaccagaaaattgttatttattggccaaagcgatgatatatgca
ttaacagatttgtggataagagatcatgacccgtttggaaacagggatgatatagtaaaa
ctcaggttggctaacacaaacccactcttctggtatacatatgaactgtgcctccaacaa
ttcattagcagtgaagacctgataaatgaaatacgaagtataagcggggggtctatacaa
ggcaagagatcaaatgaactattcgagttccttggtgaaatggctaaatcactaccgggt
gagtatatcatccttggtatcatggaaacgatgcgatatgtacagtacaacatacatgta
gtatcctttatgattaatctgttccaaggaatcctgatggatgtattcaaagacactaag
atgaacttcagcaagggattgttggagattgtatgctactgcaggcagacctttgattgg
ggattcatgacaatgctaatacatagtgtggatgcactcatggtaccggaggatggtatt
gccaacagaaatgacgtggcaaaagaaaagcttgccggtggatttatggactacttgcgt
tggaagatgcagcagattcgacagtctatctcacagggtaacgtaacaccaaatgtgttt
ataccgaactgcaatgtcattgccgagatattctgcatactcaatcatacaataggccca
tgtgacgagctgttggatatattccaggcttttgtaagtgaatacaagggacttggccac
tataaggtgctgttgataccgctctacgatgcattgaaagcgagagcaaaaggtgatacc
caacgcagtcccaaggtacccatcggtttcgatagagacctttacagctacatggtgcat
aacgaagatattcagtctaccacgtcacatatagtcgatatcatcttctcttgcaagcta
caccaaagcgtgttcgatgctgtggcgtccctgaatgcagataaaaattcactcaggaca
caaactatcctagatgtacttatgcgtaagtacatcaacaggcttgttatggtacttaac
ctgtcggtgccaaacgacttttgcttacatgttaataaaaacacaagtgaggaaactata
ggtttgggcacacgtctggctatggtcgcccagtttaccgggaagctactgtcactacac
ctaatgacggcacattgcgactcggtatacattatattcaggatcctcatagaagctatt
cgaagcacgcaggtgttcctaattgagttcgcagtggaggccttcagtgccatgggtaac
ctcctggcattccccgtgtttgccaaagtatttatcaacgaggatgttatcgcaaggctg
tatccacagtttgcatctcacgtcaaagctgccctagagcgtattgatgtatatatagtc
gaggtttgtaacaatgattccggagctgtggtattcgagaaaccacagtgcctcaaggca
ttcgatagtaaggcacgcggttcaaagggattgatgatattgaagcagagtacaacgctt
ccatacgagtttgatcctgaccacgaaggtgccatgatgcatccaaataatgccagtaca
gtgttctctatagtcaacctcgcagcgaatatacagtacaaacagctgccacaggatact
gtgtggtaccaggatcaacttactatggacctcagcaacctaacattggatgacctcctg
ggaactctgaaagtagaattcgaggcaccacctaatgccttggaaatcatgtcaatcatg
gagatgacactaagtaacaagaccttcactaatcacgtggaacagttagttaccaaagga
tatgtggattggcttttgttcgttatatacagatatgtcctaatacggggatatacctac
ttcagggactgcattgttttcatggcaacccttgggggcgctcgcatgatggatgcaatg
gtcaagtttgcggcatactgccttaatgttttcctaaagtacctcagggtatgcagatcc
aacccaatctatcgcaagctgctaacagtcagcagcgggtggatgggcgctatcacgctt
gggcgtaacaaaccgttgctgacgaaacacctggacctgaagcacctaatcctgtactcg
taccagaatggttacctaacagtaatcataccagcagtttgcaagctcctaatgaatgtc
aagtcgtcgaagatattcaggttaccgaacccttggacaagctcgttactcaacctgctc
gccgatatcgcaacatccagtggtctcaagtcaacattgcaatttgatctatcgttattg
ttcaggaaccttgagcttatacccggtccaaggttagtcaacgccttggttaaggaagtt
cccgtgtccgatgtagaccgtagtccgaaactaggaagcagtatatggtcgacttgcgca
ccgcctaacgcgccaggagctcagatgatgccacctgaattccaaattcagccggttacc
caagaggtacgtgaactactgaaacgcaagatcgttctgaacccgaaggtctcctgccta
aatgccaagtggccttggatagagatgatacttaatgccatagagtcgtgttacatggag
tcatcagaactcataaagaaaacgatgtttacgtgtatcacgacaacaaggaatataatg
atcactgactttagcggatgcaagcgtgatgtcgtggataataacccggagatgctcaaa
ataagcgccacagcaatggccagtggccttgcaacaagtttaataatggcaacttcaagg
gatcagttatgtagcctaatggcactgagactccatatgcaaatattatcggtcttgtca
atggaacctgtaccaggccactcggcactgacgaacaacctcgagcaggttagcgggttc
ctcgccaaggataacctcggtctggtgtgtgccttagttgaacaggcaacgctagagttg
atcacgggatatgtttccgcgtctatcaacgactggatagccagtattggtaaggagccg
tatgccaatgttccaaccgaacttagtatcgcactgcaatcgaatatgggactcgatacc
tataaccgctttggagcccttgtgcccttcgccatgacgcggttacaggctgacaagcac
caggggtcaccaccacatggatttggtatgccaggaggttatggcataccacaaggtggt
atgatgaacgattcggtgtcaatgatgcatcacacgaaaccaagacaaaacgccccggca
ttccggctacctgacttcatggttataccacctattgataacctgccaacttcattgatt
gcctgcaagatcgaggagtttgagcatcgcgtaaaggaagcggcgaagcagatactcacg
cacccacccacagtgccattgctaaacagcaagtacctctacagtgcagattcttcgacg
ttgctgttactgtcctgtttacccaggaaccatgctttgtttacgttactgtggtccatg
gactatatgctccagcacgctgctagccaacctgaatgcatcgaggccatagttggcaag
gtgctaaagacgtccaaagaaactagcaagggtctggacgttgtgtctatagtccaggaa
gttgagtactgcctgcttgagatgttatcagtgggtacaccattagtcgtggatatcatt
actaacgttatgccgtcactaggcccagcgcgtttgtgccaatttgttaggcacgggctt
attaagttacccgctctagataggtacatcagcggagctatggatttggaaacctgctgc
cgtactatgcacaagttggtcctggacactcaatgggtcacagcagctgatcttcccatc
agcatgagtaaactggcttcaatggatcccaatgctactgtacaaatacaaatcggtaac
agtccagtatccatagaatttggtgaactccacagaaggctgtcaactcgcatccctatg
atgcccttttcaggtgattccgatggccgtaataacatgggccacgtacccccgagcact
gagcatacacttgggtatgtaccaccaggaggtggttatccagtacagggtgctgtggga
agacctgggaataggaatatcccagatgtgcgtttgaggaccatgcgtcaacttgtggtc
gataagagcttggtacgtaacaagatggtaatcaagctttgtgaattgccaggtaaagaa
cgatatattaaaatgttccaggagtttttggtgaatgccgacaaagactcctctcaattg
taccaaaactttaatgaacaccctccagatgctttcttaacgtgtaccctcttatgcgcg
ctacagatgacatttgaacccatgggcacagaaatgaagagtgaccgccttccacaaacc
tcgcataactccccagtgtggcactactgtgacggttggtctgtaatggcagcacgtctg
tcacgtagtgagacttttatgctacacaaggcgctgcacgttatgctaggtgtgatgcag
catggattagtactcatctgtttcgaaaggatactatctaatttaatcaatgaactggag
tcgaatccgctctttttagtgtcgttggctaacttcttgacgctatgtggcccttctgag
atacccgaattcggagaatactggatatcattggtaacacgaaaacagtttttgcaccag
gtcatacaatcaccaaatgagtggccgctgtatcaccacctgctagtagaggcgttgact
tcatcgcattccaagaacccaagtataagctttgttctagtaacgctgatgcagaaggtg
cccgagtttttatgtggatactacctcagtctgtgcgatgtagtaccgccacgtgcaatg
cagctacgtaacctgctgacatgtgccgtgccacgcagcttcaagcttccgaacccaatt
attgtcacggagcatgtggaaatcccatcgctaaacttcaccaatcatataatcaccgtg
ctgaaggccagtggattgaaggtggctactgatatgttcattcacgaacctaacgaaggc
ttggtgccagttatactaaaggaactgcgattgactgaccctagcacatttgacgttgtg
ctggcgaaccactatgtgttgtatttagtcaatacactacccataatccgcaagaaaatg
ccaggaggacatcagtatgcgcaaaacagcttactcctgctcgagaaggtcattaccagc
tgtatttcacaggcaagacatatgctactaagctgcatgactaaccatttgcgctacccc
aatacctcaacgttctcctttgtctcctttatgataaggctgtttgtaaactgcgagcct
ccgatgcaggaacagataactctggcgcttctagaacggttattaataagtagaccgcac
ccttggggagttcttcatctactgttccagctagtggagaaccccaagtacgacttctgg
aatcgtattgaagcagctccagaagtggagaagcatattcgccgcatcatccaggggtgt
ttaaccccaaaggcgccgccacagcctggagcccctaacgagcatgtgcgttag
DBGET
integrated database retrieval system
