Bifidobacterium breve 12L: B12L_1321
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Entry
B12L_1321 CDS
T03118
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
bbre
Bifidobacterium breve 12L
Brite
KEGG Orthology (KO) [BR:
bbre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bbre03051
]
B12L_1321 (pafA)
Enzymes [BR:
bbre01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
B12L_1321 (pafA)
Proteasome [BR:
bbre03051
]
Prokaryotic proteasome
Bacterial regulatory particles
B12L_1321 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
AHJ16058
LinkDB
All DBs
Position
complement(1588425..1589912)
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AA seq
495 aa
AA seq
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MPQLRDSGTRSLHASEPVPSAEMDGFCRIFGVETEYGVSVTGASKPVDAGQVAMIMFQPV
VSRSRSTNTYLDNGSRLYLDVGSHPEYATAEARDPREALAQDLAGEQVMRNLALKAQRKL
RETHGERAMIHVFKNNVDSAGHAFGCHENYLVRRFVPLETIEHQLLPFLITRQLFTGAGR
MTPDGFQITQRADFLDEAVSSATTRSRPMVNTRDEPHADPDSFRRLHVIIGDSNRSQWAT
WMKLAVTHLVLCVIEDAFRNEVPSGFEDYAFADPAAANRAVSRFPDNSHAELALESGESV
TALDLQRRYYAAVEAFITNHDDALVGSLPVTGIKTVMGEWHRALDALDHGEYDALADRVD
WAAKKRLFDALRNRRPDVTFAQLEQLELDYHDIANGRLYGSLTSRNQLRELLTSNDVAIA
VHNPPTDTRAALRGQFIRAALAAGAQFSADWTHLTVAAPERREAVLLDPFESEPTEEFTQ
LMGVLPNGSDEPVQV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctgcgtgacagcggcacccgctccctgcatgcttcggaacccgtgccatcc
gctgagatggacgggttctgccgtattttcggcgtggaaaccgaatacggagtgtccgtg
accggtgccagcaagccggtggacgccggccaggtggccatgatcatgttccagccggtc
gtgtcccgctcacgttccaccaacacctatctggataatggctcacgcctgtatctggat
gtcggatcccaccccgaatacgccaccgccgaggcacgagatccgcgcgaggctctggct
caggatctcgccggcgaacaggtcatgcgcaatctggctttgaaggcgcagcgcaaactg
cgtgagactcacggcgagcgcgccatgattcacgtgttcaagaacaacgtcgactccgcc
ggtcacgctttcggttgccacgagaactatctggtccgccgttttgtgccgttggagacc
atcgagcaccagctgctgccgttcctcatcacccgtcaactgttcaccggcgccggccgc
atgactccggacggcttccagatcacccaacgtgcggacttcctggacgaagccgtctcc
tcggccaccacgcgttcccgtccgatggtcaacacgcgcgacgaaccgcacgccgacccc
gactccttccgtcggctgcatgtgatcatcggcgactcgaaccgttcgcaatgggccaca
tggatgaagcttgccgtgacgcacctcgtgctgtgcgtgattgaagatgccttccgcaat
gaagttccttctggattcgaggactatgcctttgctgaccctgcggctgccaaccgtgcc
gtcagccggttcccggacaactcacatgccgagctggcgcttgaatcgggcgaatctgtg
actgcattggatttgcagcgccggtattatgcagcggtcgaagcctttatcacgaatcat
gatgatgccttggtcggctcgctgccggtgacgggaatcaagaccgtcatgggggagtgg
caccgtgctctggacgcactggaccacggtgaatacgatgcgctcgccgaccgtgtggac
tgggctgccaagaagcgtctattcgacgcactcaggaaccgtcgaccggatgtcaccttc
gcccagttggaacagcttgagctcgattaccacgacatcgccaatggccgcctgtatggt
tcactgacctcccgcaaccagctgcgcgaactcttgacgagcaatgacgtggcaatcgcc
gtgcacaatccgcctaccgacactcgtgcagccctgcgtggtcaattcatcagggcagcg
cttgccgccggagcccagttctccgcagactggacccacttaaccgtggcggctcccgaa
cgccgcgaagccgtgcttctcgacccattcgaatccgagccgaccgaagaattcacacag
ttgatgggagtgcttccgaatggttctgatgagcctgtgcaggtttaa
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