Bordetella bronchialis: BAU06_01860
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Entry
BAU06_01860 CDS
T04591
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bbro
Bordetella bronchialis
Brite
KEGG Orthology (KO) [BR:
bbro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbro03016
]
BAU06_01860
Enzymes [BR:
bbro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BAU06_01860
Transfer RNA biogenesis [BR:
bbro03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BAU06_01860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ANN65218
LinkDB
All DBs
Position
complement(416364..416945)
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AA seq
193 aa
AA seq
DB search
MPDTPPASQPVPAEGPIRLFFALWPDAATVRALGDWAERARAVCGGRIMRPDTLHLTLGF
LGDTAPHLLPALAKETAARRIEPGTVILSRYGAFPRPRIVWAGPADDGEGQPDEGTARLA
AEHRGLWDWVRGLHPARPEARFRPHVTLLRNADTRVLPEQVPPAIAWRYDRYVLVASMQD
GSARYRIVASTQA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgccagacaccccacccgcatcccagcctgttcccgccgaagggccgatacggctcttc
ttcgcgctgtggcccgacgccgcgacagtacgggccctgggagactgggccgaacgcgcc
cgcgccgtatgcggcgggcgcatcatgcggcccgatacgctgcatctgacgctgggtttc
ctgggcgatacggcgccccatctgctgcccgcgctggcgaaagagaccgcggcccggcgc
atcgaaccgggcacagtcatcttgagccgctatggcgcgttcccgcggccgcgcatcgta
tgggcgggtcccgccgacgatggcgagggccagcccgacgaaggcaccgcgcgcctggcc
gcggaacaccgcgggctgtgggattgggtgcgcggcttgcacccggcccgcccggaagcg
cgcttccgcccgcacgtcacgctattgcgcaacgcggacacgcgggtgttgccggagcag
gtcccgcccgctatcgcatggcggtacgaccgctacgtgctggtggcgtccatgcaggac
ggatcggcgcgctatcgtatcgtcgcttccacccaggcgtag
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