Bordetella bronchialis: BAU06_03975
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Entry
BAU06_03975 CDS
T04591
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbro
Bordetella bronchialis
Pathway
bbro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BAU06_03975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbro03400
]
BAU06_03975
Enzymes [BR:
bbro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BAU06_03975
DNA repair and recombination proteins [BR:
bbro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BAU06_03975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ANN65565
LinkDB
All DBs
Position
complement(907566..909128)
Genome browser
AA seq
520 aa
AA seq
DB search
MNGTDHPTLVVSKGYDGWREQALRALAAGWPPETLTWAEHATAQDATAEQMALDYMPSSA
PGGGPAATKLAEPGPDKSRPGADDPVRPRADASGDASVRISRTLAALLQDAALYRSPQRW
AFLYRVLWRWRQGDRSVESAADEDGARLHAMVKAVRRAKHDMIAYVRFHRRPADAVPEYM
AWYEPEHDVLAYAADHFAARMGASSWLIGTPRGAALWDGRTLRLSDAPADAASIRAAAAG
DQAEPLWLAYYKSIFNPARLNENALQRQMPVRFWKGLPEGPLIPGMIAAARNGARRVAQA
DAVGAMDGRRIAVDARQAQPRRTAPSSLDACRRCELWRHATQAVPGQGPATARVMLVGEQ
PGDQEDLAGRVFVGPAGQVLDEALVRAGVPRDAVFLTNAVKHFKWLPRGKRRLHKTPAQQ
EVEACAHWLDEELARVRPAVIVTLGATALGAILRHKASMKDYLDTPVRLGDAWLVATWHP
SYALRVNDAAARGKIVEGIAAAIERGWQLAAATPGQPPSH
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcacggaccatccgacactggtggtcagcaagggctacgacggctggcgcgaa
caggccttgcgcgcgctggccgccggctggccgccggagacactgacctgggcggaacac
gccaccgcgcaggacgccacggcggaacaaatggcgctggactatatgccaagctccgcg
cccggcgggggccccgccgcgacgaagctcgcggaaccggggcccgataagtcccggcca
ggcgcggatgacccggtgcgcccccgtgccgacgccagcggcgacgcgtcggtgcgcatc
tcgcggaccctggccgccttgcttcaggacgcggcgctgtatcgttcgccgcagcgctgg
gccttcctgtaccgcgtgctgtggcgctggcggcagggcgatcgcagcgtggaatccgcc
gcggacgaagacggcgcgcgcctgcatgccatggtgaaggcggtacggcgcgccaagcac
gacatgatcgcctatgtgcgctttcaccggcgcccggcggatgccgtgccggaatacatg
gcatggtacgaaccggaacacgacgtcctggcctatgcggcggatcacttcgcggcgcgc
atgggggcgtcctcgtggctgatcggcacgccgcgcggcgcggccctgtgggacggccgc
acgctgcggctgtccgatgcgccggccgatgcggcatcgatacgcgccgccgccgcgggc
gaccaggccgagccgctgtggctggcctattacaaaagcatcttcaatccggcgcggctg
aatgaaaacgccctgcagcggcagatgccggtgcgcttctggaaggggctacccgaaggc
ccgctcatcccgggcatgatcgccgccgcgcgcaacggcgcgcgccgcgtggcccaggcc
gatgcggtcggcgccatggatggccggcggatcgccgtcgatgcccggcaggcgcaaccg
cggcggaccgcgccgtcctccctggacgcatgccgccgctgcgagctctggcgccatgcc
acccaggccgttcccgggcagggcccggcgacggcgcgggtgatgctggtgggcgaacaa
ccgggcgaccaggaagacctggcgggccgcgtcttcgtggggcccgcgggccaggtcctg
gacgaggccctcgtccgcgccggcgtgccgcgcgacgcggtcttcctgaccaatgccgtc
aagcacttcaagtggctgccccgcggcaagcggcggctgcacaagaccccggcgcagcag
gaagtcgaggcctgcgcgcattggctggacgaggaactcgcccgcgtgcggcccgcggtc
atcgtcacattgggcgccacggccctgggcgccatcctgcggcacaaggccagcatgaaa
gactatctggatacgcccgtgcgcttgggggatgcctggctggtggccacctggcacccc
tcgtatgcgctgcgcgtgaacgacgcggcggcgcgcgggaaaatcgtcgaaggcatcgcc
gccgccatcgaacgcggctggcaactggccgccgccacgcccgggcaaccgccgtctcat
tga
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