Bifidobacterium breve 689b: B689b_1391
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Entry
B689b_1391 CDS
T03119
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbrv
Bifidobacterium breve 689b
Pathway
bbrv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B689b_1391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrv03400
]
B689b_1391
Enzymes [BR:
bbrv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B689b_1391
DNA repair and recombination proteins [BR:
bbrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B689b_1391
Prokaryotic type
B689b_1391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AHJ23389
LinkDB
All DBs
Position
1646425..1647114
Genome browser
AA seq
229 aa
AA seq
DB search
MIKPLRELVEPGWANALADVEPAIHRMGDFLREENAAGRPWLPASHNILRAFTIPFDSIK
VLIVGQDPYPTPGHPVGLSFCVAPEVRPLPKSLINIYKELVDDLGVPMPPNGDLTAWTER
GVMLLNRCLTVGVGRPNSHQGKGWEEVTEAAIRALNARVDGNGKPKPLVAILWGRNAQSL
EPLLTNAFIIKSPHPSPLSASRGFFGSKPFSRANQALINMGAEPVDWSL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaccattgagagaactggtagagcccggatgggcaaacgcactggccgatgtt
gagccggccatccaccgcatgggcgattttctccgggaggagaacgccgcaggcagaccc
tggctgccggccagccacaatattctcagggcctttaccattccgtttgattcgatcaag
gtactgatcgtgggccaagacccctaccccactcccgggcatccggtgggactgagcttc
tgcgtggcaccggaggtacgaccactgccgaagagcctgattaatatctataaggaactg
gtcgacgatctaggcgtgccgatgcccccgaacggagacctgacagcatggaccgagcgc
ggggtcatgttgctgaacaggtgcttgaccgtgggagtcggacgccccaactcccatcag
ggcaaaggctgggaagaagtcaccgaagccgctatccgagcattaaacgcacgcgtggac
ggcaacggcaaaccgaagcccttggtggctattctatggggacgcaacgcgcagagtctg
gaaccgctgctcaccaacgcctttattattaagtcacctcatccgagcccgctttccgca
tcccgaggtttcttcggctccaaacctttctctcgagctaatcaggcccttatcaacatg
ggtgccgagcccgtggattggagtctgtaa
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