Brettanomyces bruxellensis: BRETT_002907
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Entry
BRETT_002907 CDS
T07183
Symbol
DBP5
Name
(RefSeq) RNA helicase required for poly(A+) mRNA export
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03013
Nucleocytoplasmic transport
bbrx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
BRETT_002907 (DBP5)
03015 mRNA surveillance pathway
BRETT_002907 (DBP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_002907 (DBP5)
Enzymes [BR:
bbrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BRETT_002907 (DBP5)
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
BRETT_002907 (DBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
64574831
NCBI-ProteinID:
XP_041139215
UniProt:
A0A871RII2
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All DBs
Position
9:join(2510575..2510581,2510678..2512134)
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AA seq
487 aa
AA seq
DB search
MTDTTNSTKEDASTLLSKLTLAEKKGKEELKKNSEETSKTSDSPKVETKKEKTKETKREE
ANGINKEKESNLINSSYEVKVNLADLQADPNSPLYSVKSFEDLGLTEGLLKGLYAMKFSK
PSKIQEKALPLLLANPPKNLIAQSQSGTGKTAAFALSMLSRVDENKKCPQAICLSPAREL
ARQTLEVIEEMGKYTGISYQLVVPGSTAREERINAQILVGTPGAILGLTKRGSIDVSAVK
IFVLDEADNMLDQQGLGSQCLRYKNSLPKQVQIALFSATFPEKVNKYAKRFVPNANTLEL
KQEELNVKAIKQLYMDCDSEGHKFECLCELYGLLTIASSIIFVQRKITADKLYIRMKNEG
HAVSVLHGGLVPEDRDRLIDDFREGRSKVLITTNVLARGIDIPSVSMVVNYDMPYDKNGK
PDPETYLHRIGRTGRFGRTGVSISFIHDKKSYECLKYIAHYFGGLELTRVPSDDWDEVEK
IVKKVIK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacaacaaatagtaccaaagaggatgcctcaactcttctttcaaagttgacg
ttggctgagaagaaaggcaaggaagaactgaagaaaaacagtgaagaaactagcaaaacg
tctgactcaccaaaggttgaaaccaagaaagaaaaaacaaaggagacaaagagagaagaa
gcaaatgggataaataaagagaaagaaagcaaccttattaactcatcttatgaggtgaag
gtgaaccttgccgatttacaagcagatccaaattctccgctttattctgttaaatcgttc
gaagatttgggcttaacggagggtttgttgaaaggattgtatgcaatgaagttttcgaaa
ccttccaaaattcaagagaaagctttaccgttgcttctggctaatccaccaaaaaactta
attgcccaatcacaatctggtacaggaaaaacggcagcttttgctctctctatgctcagt
cgagttgatgagaataaaaaatgtccacaggctatatgtctatctccagcgcgtgaattg
gctagacaaactttggaagttatcgaggaaatgggtaagtacactggcatttcatatcaa
ttggtggttccaggaagtacagcaagggaagaacgtataaatgctcaaatattagtggga
acccctggcgctattttgggtttaacaaaaagaggatcaatagatgtttctgccgtgaaa
atttttgttttggatgaagcagataatatgcttgatcagcaaggtcttggtagccaatgt
ctcagatataagaattcgcttccaaagcaagttcaaattgcgttgttttcggctacgttt
ccagaaaaggtgaacaaatacgcaaaacggtttgttcccaatgcaaacacactagaattg
aagcaggaagaattaaatgtgaaggccattaaacagctttacatggactgtgattccgaa
gggcacaagtttgaatgcttgtgtgaattatatggtttgttaactatagcttcatctatt
atctttgttcagaggaagatcaccgctgataagttatacatcaggatgaaaaacgaagga
catgcggtttccgttcttcatggtggtcttgttcctgaggatcgtgaccgtcttattgat
gacttcagggaaggaagatcgaaagtccttattactaccaacgttcttgccaggggtatc
gatattccttctgtttctatggttgttaactatgacatgccatacgataagaatggaaaa
ccggacccggaaacataccttcacagaattggacgaacaggtagatttggaagaacaggt
gtttctatttcattcatccacgataagaaatcttatgagtgcttaaagtacattgcacat
tactttggtggattagaattgaccagggttccatcggatgactgggatgaggtcgaaaaa
attgttaagaaggtgatcaaatga
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