Brettanomyces bruxellensis: BRETT_003659
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Entry
BRETT_003659 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BRETT_003659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_003659
Enzymes [BR:
bbrx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
BRETT_003659
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
BRETT_003659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_16
ATP_bind_1
ATPase_2
RuvB_N
Gtr1_RagA
AAA
AAA_10
DLIC
ABC_tran
Motif
Other DBs
NCBI-GeneID:
64575582
NCBI-ProteinID:
XP_041136003
LinkDB
All DBs
Position
6:complement(490031..491506)
Genome browser
AA seq
491 aa
AA seq
DB search
MSLDTSVLKSILSKSDNEPHIEKFEEQVEQHQVEVPAFQEWRFELTNKDTLKIKLTKGTA
EIFGTELSPNYEYTFQGSLKSCISTFSGCTLEYYNCQPSSEYVGEETCMGTLLNLHLALE
NIRAKGPNGPRVLVIGPKNSGKTSLCRVIASYAEKMDGRPLYVNLNPQEPVFTIPGNLTA
TAISGMFNIENICLGETITTGPSFYHPKQPLVKNFGLENYRDNLKFYKYLIGQMSGCIEK
RLEKSSDVRSSGIIVDTPAFHIGDLDVIQCIIDELKIDILIVVGNERLLVDLKRKLKYDE
NRLTLLKVAKSSGCVDMDDKLQREIQQRAIKEYFYGISSSPLSPYTMVVNLKDFVFLNPK
VLEALNLAFLSGDTADDDSAEAGTGLEASAVTTSFDDYMERLKAPSSSNLENAILAFADD
SDLEMGKYIGSPDDTENNTILIKTVSGRNTLGFCYVLHCDDEKGKLKLLIPSPVQHLPTK
VLVVTQFRYNE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggatacgtccgttcttaaatcaatattgagtaagtcggataatgaacctcat
atagagaaatttgaggagcaagtagaacagcatcaagttgaagttcccgctttccaggaa
tggagattcgaacttaccaacaaggatacactcaagatcaaactcactaaaggaacagct
gagatttttggaacagagctttcaccgaactacgaatatacgtttcaaggatctctcaaa
tcatgtatttctactttttctggatgtacacttgagtattataactgtcagccttcttca
gagtatgtcggcgaggaaacatgcatgggtacacttttaaatttgcatttagctcttgag
aatataagagctaaaggaccaaatggccccagagtgttagttatcggcccgaaaaactct
ggaaagacttctttgtgtcgcgtgattgcatcatacgcagaaaaaatggatggacggcca
ttatatgttaatctaaatccccaggaacctgtttttaccatacctggaaatttaacggcc
actgcaatatctgggatgtttaacatagaaaatatctgccttggagagacaattaccaca
ggcccatccttttatcacccaaagcagcccttggtgaagaactttggactcgagaactat
agggacaatttgaaattttataagtatttgattggtcagatgagtggttgtatagaaaaa
aggttggaaaagagttcggatgttcgttcttccggtattatagtagacacccccgctttc
catattggtgatctcgatgtgatccaatgcattatagatgaacttaagatagacatcttg
attgttgtaggaaatgagagactattggttgatcttaaacggaaactaaaatacgacgaa
aatagactcacacttctaaaagttgccaaatctagtggatgcgttgatatggatgataag
cttcagcgtgagattcaacagcgggctattaaagagtacttctacggaataagtagctct
cctttgagtccgtacacaatggtggtgaacttgaaagatttcgtgtttcttaatccaaaa
gtgttggaagctctaaatctggcatttctttctggagatactgctgatgatgatagtgca
gaggctggaaccggattggaagccagtgcagtgacaacctcttttgatgattatatggaa
agattgaaggctccgtcctcatctaatttagagaatgcaattttggcctttgctgatgat
tcagatctggaaatgggaaagtacattggtagccctgacgatacagaaaataataccatc
ttgattaagacggtttctggaagaaatactttgggattctgctacgtattgcattgtgat
gatgaaaagggaaagctcaaactcttgataccttcacctgttcaacatctgccaacaaaa
gttttggttgtgacccaattcagatacaatgagtga
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