Bubalus bubalis (water buffalo): 102393602
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Entry
102393602 CDS
T05912
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102393602 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102393602 (TRIM71)
04121 Ubiquitin system [BR:
bbub04121
]
102393602 (TRIM71)
Enzymes [BR:
bbub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102393602 (TRIM71)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102393602 (TRIM71)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102393602 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
zf-C3HC4
zf-RING_5
zf-RING_UBOX
COG5_N
Motif
Other DBs
NCBI-GeneID:
102393602
NCBI-ProteinID:
XP_025128055
EnsemblRapid:
ENSBBUG00015018387
LinkDB
All DBs
Position
21:7255261..7320611
Genome browser
AA seq
876 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSN
LLDAVVATADEPPPKNGRAGAAAGAGGHGSNHRHHAHHAHPRAAASAPPPPLPPAPPPPA
PSRSAPGGPAGSPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKD
HYIERGPPGPAAAAAAAAAQQLGLGPPFPGAPFSLLSVFPERLGFCQHHDDEVLHLYCDT
CSVPICRECTVGRHGGHSFVYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQ
VEMKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLE
STISAVQQVLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAI
KSFGFVSSGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPD
GNLFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLP
GLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQ
FDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEG
KILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLL
VIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFG
AQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccctgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtcggcgtcgtcgtcatcttcgcagacgtccacg
tcgtcggggggcggcggcgggggccccggggccgcggcgcgccgcctgcacgtcctgccc
tgcctgcacgccttctgccgcccgtgcctcgaggcgcaccggctgccggcggcgggcggc
ggcggcggcgcgccgggagagccgctcaagctgcgctgccccgtgtgcgaccagaaggtc
gttctggccgaggcggcgggcatggatgcactgccctcgtccgccttcctgctcagcaac
ctgctcgacgccgtggtggccacggccgacgagccgccgccgaagaacgggcgggccggc
gccgcagcgggcgcaggcggccacggaagcaaccatcggcaccacgcgcaccacgcgcac
ccgcgcgcggccgcctcggcgccgccgccgccgctccctcccgcgccgccgccgcctgcg
ccgtcccgctcggcgcctggcggccccgcaggctccccgtcggcgctgctgctgcgccgg
ccccatggctgcagctcctgcgacgagggcaacgcggcctcgtcgcgttgcctcgactgc
caggagcacctgtgcgacaactgcgtccgcgcgcaccagcgcgtgcgcctcaccaaggac
cactacatcgagcgcggcccgcccggccccgccgcagccgctgccgcggcagcggcgcaa
cagctcgggctcgggccgcccttcccaggcgctcccttctccctcctctccgtcttcccg
gagcgcctcggcttctgccagcaccacgacgacgaggtgctgcacctatactgcgacacg
tgctccgtgcccatctgccgcgagtgtacggtgggccggcacggcggccacagcttcgtc
tacctccaggaggcgctgcaggactcgcgggccctcaccatccagctgctggccgacgcc
cagcaaggccgccaggccatccagctgagcatcgagcaggcccagacggtggcagagcag
gtggagatgaaggcgaaggtggtgcagtcggaggtcaaagctgtgactgcgagacacaag
aaagccctggaggagcgggagtgtgagctgctgtggaaggtagagaagatccgccaggtg
aaggccaagtcactgtacctgcaggtggagaagctgcggcagaacctgaacaagctggag
agcaccatcagcgccgtccagcaggtcctggaggagggccgggcgctggacatcctgctg
gcccgggaccgcatgctggcccaggtacaggagctcaagaccgtccgcagtctcctgcag
ccccaggaggacgaccgggtcatgttcacaccccccgaccaggccctgtatcttgccatc
aagtccttcggcttcgtcagcagcggggccttcgcgccgctcaccaaggccacgggcgat
ggcctcaagcgggccctgcagggaaaggtggcctccttcaccgtcatcggctacgaccat
gacggggagccacggctgtcggggggtgacctcatgtcggccgtggtcctgggccccgat
ggcaacctgtttggtgcggaggtgagcgaccagcagaacgggacatacgtggtgagctac
cggccgcagctggagggggagcatttggtgtcggtcaccctgtgcaaccagcacatcgag
aacagccccttcaaggtggtagtcaagtctggccgcagctacgtgggcattgggctccct
ggcctgagctttggcagcgagggtgacagcgacggcaagctctgccgcccatggggcgtg
agcgtggacaaggagggctacatcgtggtggccgaccgcagcaacaaccgcatccaggtg
ttcaagccgtgcggcgccttccaccacaagttcggcacgctgggctcccggccggggcag
ttcgacaggcctgccggggtggcctgtgatgcctcccgcaggatcgtggtggccgacaag
gacaatcatcgcatccagatcttcaccttcgagggccagttcctcctcaagttcggggag
aagggcaccaagaacgggcagttcaactacccctgggacgtggcggtgaattccgagggc
aagatcttggtctcagacacgcggaaccaccgcatccagctgttcgggcccgacggggtc
ttcctgaataagtacggcttcgagggggctctctggaagcactttgactccccgcggggc
gtggctttcaaccacgagggccacttggtggtcaccgacttcaacaaccaccggctcctg
gtcatccatccggactgccagtcggcccgcttcctgggctccgagggcacgggcaacggg
cagttcctgcggccgcagggcgtggctgtggatcaggaggggcgcatcatcgtggccgac
tccaggaaccaccgagtgcagatgttcgagtccaacggcagcttcctgtgcaagttcggc
gcccagggcagtggcttcgggcagatggaccggccctccggcatcgcggtcacgccggac
gggatgatcgtcgtggtggacttcggcaacaatcgaatcctcatcttctaa
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