KEGG   Bubalus bubalis (water buffalo): 102397430
Entry
102397430         CDS       T05912                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X3
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102397430 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbub03400]
    102397430 (TDP1)
DNA repair and recombination proteins [BR:bbub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102397430 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 102397430
NCBI-ProteinID: XP_044780569
LinkDB
Position
11:complement(1553429..1628331)
AA seq 612 aa
MVSQEGNYGKWTISSSDESEEEKPQPDKPSASLLPEARQGAAGQLKYTCSEARKAAHRRK
LEPMKFSSTDSVSEASPCKRQKTGSQEDLGWCLSSSEDELPRELQQEQAKDSRVKEEKGP
LSPRDRTARGAGPHSPPTSCGLPEEEDEQETSGEGQDVWDLLDKGNPFQFYLTRVSGIKP
KYNTGALHIKDILSPLFGTLVSSAQFNYCFDVDWLIRQYPPEFRKKPVLLVHGDKREAKA
HLLAEAKPYGNVTLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIREDWHQKTQGI
WLSPLYPRVVHGTHGSGESATNFKADLISYLAAYNAAPLKEWIDTIREHDLSETNVYLIA
STPGRFQGNQKDNWGHFRLRKLLKEHASPMPKAESWPVIGQFSSIGSMGADESKWLCSEF
KESLVTLGKESRTLGSAVPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAQKQNWLHSYF
HKWSADTSGRSNAMPHIKTYLRPSPDFSQIAWFLVTSANLSKAAWGALEKNGTQLMIRSY
ELGVLFLPSAFGLDSFKVKQKFFSGSSQEPTASFPVPYDLPPELYGDRDRPWIWNIPYVK
APDTHGNMWVPS
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggtgtcccaggaaggcaattatgggaagtggacaatatccagtagtgatgaaagtgag
gaggagaagccgcagccagacaagccatctgcctctctcctccccgaggccaggcagggt
gccgccgggcagctgaagtacacctgctccgaggctcggaaagccgcccacaggaggaag
ctggagcccatgaaattcagcagcacagactcagtttcagaagcttcaccttgcaaaaga
cagaagaccggttcccaggaggacctgggctggtgtctgtccagcagtgaggatgaactg
cctcgagagctgcagcaggagcaggcgaaggactcgagggtcaaagaggagaaaggcccc
ctttctcccagggaccgcacggctcggggagctgggcctcacagccccccaaccagctgt
gggctcccggaggaggaagatgagcaggaaacatcaggggaaggccaggacgtctgggac
ttgctggataaagggaaccccttccagttctacctcacgagagtctctgggattaagccc
aagtataacacgggagccctccacatcaaggatattttatctcctctctttgggacactt
gtttcttcagctcagtttaactactgctttgacgtggactggctcataagacagtatcca
ccagagttcaggaagaaaccagtcctgcttgtgcatggcgacaaacgggaagcaaaggct
cacctccttgccgaggcgaagccttacgggaacgtcaccctctgccaggcaaagttggat
attgcatttggaacacaccacacgaaaatgatgcttctgctgtatgaggaaggcctccgg
gtcgtcatacacacgtcgaacctcatccgcgaggactggcaccagaaaacacagggaata
tggttgagccccttgtaccccagagtcgtccacgggacccacggatctggagaatcggcc
acaaacttcaaagctgacctcatcagctacctggcggcttataacgctgcccctctcaag
gagtggatagacaccatccgggagcacgacctctcagaaacaaatgtttaccttattgcc
tcaaccccgggacgctttcaaggaaatcagaaagataattggggacatttcaggcttagg
aagcttctaaaagagcacgcctcacccatgcctaaagcggagtcttggccggtcataggt
cagttctccagcattggctccatgggggcagacgaatcaaaatggttgtgttctgagttt
aaggagagcctggtgaccctgggcaaggagagcaggaccctaggaagtgctgttcctctc
catctgatctatccttcagtggaaaatgtgcggaccagcttagaaggatatccagctggg
ggctctcttccctatagcatccagacggcgcagaaacagaattggcttcattcctatttt
cacaagtggtcagctgacacgtcaggccgcagcaacgccatgccacatattaagacgtac
ctgagaccctctccagacttcagtcagatcgcttggttccttgtcacaagcgccaacctg
tccaaggctgcctggggcgcgctggagaagaatggcacccagctgatgatccgctcctac
gagcttggcgtcctctttctgccgtcagcgtttggcctggacagtttcaaagtgaaacag
aaattcttctctgggagcagccaggagcccacagcctccttccctgtgccgtacgaccta
cctccagaactgtacggagacagagatcgaccatggatttggaacatcccttatgtcaaa
gcacctgatacacacgggaacatgtgggttccctcctga

DBGET integrated database retrieval system