KEGG   Bubalus bubalis (water buffalo): 102398482
Entry
102398482         CDS       T05912                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3A subunit 3-like
  KO
K12827  splicing factor 3A subunit 3
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102398482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bbub03041]
    102398482
Spliceosome [BR:bbub03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102398482
 Complex B
    102398482
 Complex C
   U2 SnRNP specific factors
    102398482
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 102398482
NCBI-ProteinID: XP_044782037
LinkDB
Position
12:68208015..68209803
AA seq 501 aa
METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMXDRYMEVSGNLRDL
YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENP
SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKERKNA
EYKRYLEMLLENLQDYTDRVKPLQDQNELFGKIQNEFEKKWENGTFPGWPKETSSALTHA
GAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSL
FAKNPKTKGTKRDTERNKDIAFLEAQIYEYVEILGEQXHLTHENVQRKQARTGEEREEEE
EEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPK
AFQRHFAEWRHVHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASERWQPDTEEEYE
DSSGNIVNKKTYKDLKRQGLL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggaaacgattctggagcagcagcggcgctatcatgaggagaaggaacggcttatggat
gtcatggccaaagagatgctcactaagaagtccacgctccgggaccagatcaattctgac
caccgcacacgggccatgtaagataggtatatggaagtcagtgggaatctgagggatttg
tatgacgacaaggatgggttacgaaaagaggagctcaatgccatttcaggacccaatgag
tttgctgaattctataatagactcaaacaaataaaggaattccaccggaagcacccaaat
gagatctgtgttccaatgtcagtggaatttgaggaactcctaaaggcgcgagagaatcca
agtgaagaagcacaaaatttggtggagttcacagatgaagagggatatggtcgttacctg
gatcttcatgactgttacctcaaatacattaacctgaaggcctctgagaagctggattat
atcacttacctgtccatctttgaccagttgtttgacattcctaaagaaaggaagaatgcc
gagtacaagagatatctggagatgctgcttgaaaaccttcaggattacacagatagagtg
aagcctctccaagatcagaatgaactttttgggaaaattcagaatgagtttgagaagaag
tgggagaatggtacttttcctggatggccgaaagagacaagcagtgccctgacccatgct
ggagcccatcttgacctctctgcattctcctcctgggaggagttggcctccctgggtctg
gacagattgaaatctgcactcctagctttaggcctgaagtgtggagggaccctagaagag
cgagcccagaggctattcagcaccaaaggaaagtccctcgagtcacttgacacctccctg
tttgccaaaaatcccaagacaaagggcaccaagcgagacactgagaggaacaaagacatt
gctttccttgaagcccagatatacgaatatgtagagattcttggggagcagtgacatctc
actcatgagaatgtgcaacgcaagcaggcaagaactggagaagagcgggaagaggaagag
gaagagcagatcagtgagagtgaaagtgaagatgaagagaatgagatcatttacaacccc
aaaaacctgcccctgggctgggatggcaaacccattccttactggttgtataagcttcat
ggcctaaatatcaactataactgtgagatttgtggaaactatacctaccgaggtcctaag
gctttccagaggcactttgctgaatggcgccatgttcacggcatgaggtgtttgggcatc
ccaaatactgcccactttgctaatgtgacacagattgaagacgcggtctccttgtgggcc
aagctgaaactgcagaaggcatcagaacgatggcagcctgacactgaggaagaatatgaa
gactccagtgggaatattgtgaataagaagacgtacaaggatctgaaaagacaaggactg
ctctag

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