Bufo bufo (common toad): 121002690
Help
Entry
121002690 CDS
T07950
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121002690 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbuf03036
]
121002690 (TRIP13)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
121002690 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
nSTAND3
AAA_18
Viral_helicase1
Cytidylate_kin
AAA_14
AAA_5
NPHP3_N
AAA_24
TsaE
AAA_28
AAA_33
RuvB_N
IstB_IS21
RNA_helicase
AAA_7
DUF815
AAA_11
TIP49
ABC_tran
ATPase_2
AAA_30
AAA_25
Mg_chelatase
bpMoxR
AAA_17
NACHT
Zot
AAA_19
ATPase
PduV-EutP
Rad17
DUF6707
SLFN-g3_helicase
NB-ARC
PhoH
nSTAND6
AAA_3
NTPase_1
Motif
Other DBs
NCBI-GeneID:
121002690
NCBI-ProteinID:
XP_040290073
LinkDB
All DBs
Position
5:complement(259419717..259631092)
Genome browser
AA seq
470 aa
AA seq
DB search
MSNVQFTQQLWRDALRSPWVQSISLKEITSQSRLYQRRMDEAAGDLKQALPNVVDSLQVH
VEVHQKSNSTAKTEDVTVHVMQLLNRHNVVFGDYTWTEFDDSFLVQNVNSVAVVDTELKL
KDRKPIDLGKCNIYVHVFQLSEEGPSAENLEEENEDLVAANHWLLPAADFHKLWESLIFD
SEIKSNLLDYVTTTLLFSDKSVNSNLIAWNRVVLLHGPPGTGKTSLCKALAQKLSIRLSS
RYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIHEVIDDSDALVFVLIDEVESLTAARS
ASRAGTEPSDAIRVVNAVLTQIDQIRRYPNVVILTTSNITEKIDMAFVDRADIKQYIGPP
SPAAIFNIYISCIEELMKCQIIYPRQQLLTLRDLEMIDYVENNVSKLSLLLNEISRKSEG
LSGRVLRKLPFLAHALFIQSHTVTIEKFLEALSLAVDKQFEERKTLKESI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgtgcagttcacacagcagctatggcgggatgcgcttaggtctccctgggta
caaagtattagtctgaaggagataaccagccaaagcagactctaccaaaggaggatggat
gaagctgcgggagatctaaaacaagcccttccaaatgtagttgattctcttcaagtacat
gtagaagtacatcaaaaatcaaacagcacagcaaaaacagaagatgtcacggttcatgtc
atgcagttattaaacagacacaacgttgtatttggcgattacacctggacggaatttgat
gactcctttttagtgcaaaatgtgaactctgtggctgttgtagatacagagcttaagcta
aaggacagaaagcctattgaccttggaaaatgcaatatatatgtccatgtatttcaactg
agtgaagaaggaccaagtgcagagaatttggaggaagagaatgaggatcttgtggcagct
aaccactggctactacctgctgctgactttcataagctttgggaaagtctgatatttgac
agtgaaataaagtcaaatcttttagattatgttacaacaacgctgcttttttctgacaaa
agtgtaaatagcaatttgattgcatggaacagagtcgtccttttgcatggacctcctggt
actgggaaaacatcactttgcaaagcactggctcagaagctgtccatcagattgtcaagc
agatatagatatggccaactcatagagattaatagccacagtctcttctcaaaatggttt
tcagagagtggcaagttagtaaccaagatgtttcagaagattcatgaagtcatagatgac
agtgatgctctagtgtttgtgttgatcgatgaggtagaaagccttactgcagcacgaagt
gcttctagagcaggcaccgaaccatctgatgctattcgtgtagtgaatgctgttcttact
cagatagatcaaataagaaggtatccaaatgtagttatcttgacaacttccaacattact
gagaaaattgatatggcctttgttgacagagcagatataaaacaatatattggcccacca
tctcctgctgcaatttttaacatttacatttcttgtatagaagaacttatgaagtgtcag
ataatataccccagacagcaactacttactttacgagacttggaaatgattgactatgtg
gaaaataatgtatccaagcttagtttattgctaaatgaaatttctagaaaaagtgaaggt
ctcagcgggagagttcttaggaaacttcctttcttggcacatgcactttttatacaatct
catacagttacaattgaaaaattcctcgaagctctttcattggcagtggataagcagttt
gaagaaaggaaaaccctcaaggagagcatttga
DBGET
integrated database retrieval system
