Bufo bufo (common toad): 121009050
Help
Entry
121009050 CDS
T07950
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbuf04040
]
121009050
Ion channels [BR:
bbuf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121009050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
HB_ELP1
Zip
Motif
Other DBs
NCBI-GeneID:
121009050
NCBI-ProteinID:
XP_040297890
LinkDB
All DBs
Position
7:193310020..193500363
Genome browser
AA seq
2007 aa
AA seq
DB search
MEQPLVPPPGPDSLRLFTRESLAVIEKRIAEEKAKKPAKDRRDDDDENGPKPNSDLEAGK
SLPFIYGDIPSGMVSEPMEDIDPYYSNKQTFIVLNRGKAIFRFSATSALYILTPFNPIRR
YSIKILVHSLFSMLIMCTILTNCVFMTMSSPPEWTKNVEYTFTGIYTFESLVKILARGFC
LEGFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGHLRNKCVRWPPDYEANITSYFNATAGMN
GSYVNLTANPFDKEEYILNERNYYFFPGQRDALLCGNSTDAGQCPKGFVCLKTGRNPNYG
YTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILAV
VAMAYEEQNQATLEEAEQKEAVFQQMIEQLRKHQEDIQQAAAQEAALGSREFSGGTGYGG
LSESSSEASKLSSKSTKLSSKSAKERRNRRKKRHQKEKGDGDEKCDDEKFHKSTSESNLK
KFLYDGIRLTKTSSPHESLLDVRNDVTPRRNSRTSMFSMFLGRGKDVASENDFADDEHST
FEDNESRRGSLFVPHRQRRESNFSQASKASRTLPVVPVNGKMHSTVDCNGVVSLFGGPSA
PTSPAGLLLPEGTNTDNDFRKRRLSSYHVSMDLLEDPILRQRALSIASNLTNTMEELEES
RQKCPPCWNKFANTYLIWDCCDVWLKIKNVLNIIVMDPFVDLTITICIVLNTLFMAMEHY
PITDEFNRVLNVGNLVFTGIFTAEMIFKLIALDPYYYFQVGWNIFDSIIVSLSLMELGLS
NVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ
LFGKSYKECVCKIAPTCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLT
VFMMVMVIGNLVVLNLFLALLLSSFSSDNLSATDEDNEMNNLQIAVARMHIGIAHVKKSA
REFVQNAFVKKKKELEENKPLEDMQNQKDSCISNHTTVEIGKEFEYLKDGNGTTATSGIG
SSVEKYIIDESDYMSFIHNPSLTVTVPIAVGESDFENLNTEEFSSESDLDESKEKLTLSS
SSEGSTVDIGPAGEGEPVALVEQEEVMEPEACFTEGCIRRFPVCDVSTLEGKGKHWWNLR
KTCFRIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEML
LKWVAYGFAKYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNMFSGKYGYCLNVTADEYFSVD
IVNNKTDCLTLIAQNESARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRKLE
EQPMYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPVPRPQNKFQGAVFDFVSMQPFDITIMVLICLNMVTMMIETDDQSDE
KENNLYWINAVFIVLFTGECILKLVSLRHYYFTMGWNIFDFVVVILSIVGMFLADLIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKKEAGIDDMFNFETFGNSMICLFMITTSAGWDGLLAPILNSKAPDCDPHAEHP
GSSVRGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVATEESAEPLGEDDFEMF
YEVWEKFDPDATQFIQYSKLADFADALDPPLRIPKPNYVQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGEGDEMDNLRQPMEERFMASNPSKASYEPITSTLRRKQEEQSAVIIQRAFRC
YLLKKSIKRASFLYNQDKGKDGDSLITRKDILSDRLNGNSTTDKVDITPSTTSPPSYDSV
TKPDKEKHEKDKIEKEDRGKDIRERKK
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccacttgtacccccaccaggacctgacagccttcgcttgttcactagagaa
tctcttgcagttatcgaaaagcgcattgcagaagaaaaagctaagaaaccagcaaaggat
cgtagagatgatgatgatgaaaatggccccaagccaaattcggacttggaagcaggcaaa
tccttgccttttatatatggagacataccttcaggaatggtgtccgaaccaatggaggac
attgacccgtattacagtaacaaacagacctttatagtattgaatagagggaaggcaatc
ttccgcttcagtgccacgtctgccttgtacattttaactcccttcaaccctattagaaga
tattcaataaagattttggtacattcattattcagcatgctcataatgtgcactattttg
accaactgcgtattcatgaccatgagtagtcccccggagtggaccaagaatgtagaatat
accttcactgggatttatacctttgaatcgctagtaaaaattctggcgcgaggattttgc
ttagaaggtttcacttttctgcgggacccatggaactggctcgacttcagcgtcattgtc
atggcatatgtgacagagtttgtggacctgggcaatgtctcagcattgagaacattcaga
gttctccgagcattgaaaacaatatcagtcattccaggcctaaagaccattgtgggggcc
ctgattcagtctgtgaagaagctttcagatgtaatgatcctcacagtgttttgtctgagt
gtgtttgcactaataggactgcaactttttatgggacacttaagaaataagtgtgttagg
tggcccccagattatgaagcaaatattacctcttactttaatgctactgctggcatgaat
ggctcctatgtaaacttaactgcaaacccatttgacaaagaagaatacattttaaatgaa
agaaattattacttttttcctgggcagagggacgcccttctttgtggaaacagtacagat
gctggccaatgtccaaaggggtttgtatgtttgaaaactggtaggaacccaaactatggc
tacacaagctttgataccttcagctgggccttcctgtctctatttcgactaatgacgcag
gactactgggagaatctttaccaactgaccctacgagctgccgggaaaacctacatgatc
ttcttcgtattggtgatcttcttgggctccttctatttggtgaacttgatcctggccgta
gttgccatggcttatgaagagcagaaccaggccactctagaagaagctgagcagaaggaa
gctgtatttcagcagatgatagagcagctgagaaaacatcaggaagacatacagcaggct
gcagctcaagaggcagccctcggctccagagagtttagtggtggaacaggttatggtgga
ctctccgagagttcatccgaagcttcaaagttaagttcaaaaagtaccaagttaagctca
aaaagtgccaaggaaagaagaaacagaagaaagaaacgacatcaaaaagagaaaggggac
ggagacgagaaatgtgacgatgaaaagtttcataaatccacatcagaaagcaacctgaaa
aagttcctctatgatggaattagattgacgaagacctcatcaccccatgagtctctgctg
gatgtccgcaatgatgtcacaccaaggcgcaacagcaggaccagcatgttcagcatgttc
ctaggccgtgggaaagatgtggcatcagaaaacgactttgcagatgatgaacacagcaca
tttgaggacaatgagagtagacgaggatccttgtttgtacctcacagacaaagacgagaa
agtaacttcagtcaagctagcaaggcttccagaaccctaccagtcgtcccagtgaatggc
aagatgcacagcaccgtggactgcaatggagtggtctccctgttcggtggtccatctgct
ccaacatcgcctgctggactactactgccagagggtacaaacacagataatgattttagg
aaaagaagattaagctcatatcatgtttccatggacttgttggaagatcctatattgaga
caacgggctctgagtatagccagtaatctcaccaacacaatggaagagttggaggaatcc
agacaaaaatgcccaccatgttggaacaaatttgccaacacatatttgatctgggactgc
tgtgacgtatggctgaaaataaagaatgtactcaatataatagtcatggacccatttgtt
gacctcacaattacgatctgcattgttttaaatacattatttatggcaatggaacattat
ccgataactgatgaatttaatagggtgctcaatgttggaaatctggtcttcacgggtatt
tttacagcagagatgatatttaagctgatcgcccttgatccatattattatttccaagtc
ggatggaacatatttgatagtattatagtcagtctcagtttgatggaactcggcctttcg
aatgtggaagggttgtccgttctcagatcattcagattgcttcgtgtcttcaaattagca
aaatcgtggcctaccctcaacatgctgatcaagatcattggtaactcggtgggagctttg
ggaaacctgaccttggtgttggccatcatagtgttcatctttgccgtggtcggtatgcag
ctgtttggtaaaagctacaaggaatgtgtctgtaagattgcacctacttgtactcttcct
cgctggcacatgaacgacttcttccactccttcctgattgtcttccgagtgctatgtgga
gaatggatcgagaccatgtgggactgtatggaggtggcaggacaatctatgtgtttaaca
gtgttcatgatggtgatggttatcggaaatttagtggtgttaaacctgttcttagctttg
ctgctgagctcatttagttctgacaatctttctgccacagacgaggataatgaaatgaat
aatctacaaattgccgtggccagaatgcacattgggatagctcacgtgaagaagagcgcg
cgggagtttgtccagaacgcatttgtcaagaaaaagaaagaattagaggaaaataaacct
ttggaagacatgcaaaaccagaaagacagctgcatatccaaccacaccactgtggaaatc
ggcaaagagtttgagtacctgaaagatgggaacgggactactgccacaagtggaatcggt
agcagtgttgaaaaatacatcattgatgaaagtgattacatgtcttttatacataacccc
agtctcaccgtcactgtacctattgctgttggagaatctgattttgaaaatctaaataca
gaggaatttagcagtgagtcagatctcgatgagagcaaagagaaattgaccctatcaagc
tcgtcagaaggcagcactgttgacataggaccagcaggggaaggagaacccgtagcttta
gtagaacaggaggaagtcatggaaccagaggcttgctttacagaagggtgtataagaagg
ttcccagtgtgtgatgtcagcacattagaaggtaaaggaaagcactggtggaatctcagg
aaaacatgtttccggattgtcgagcacaactggtttgagactttcattatcttcatgatt
ttacttagcagcggggctctggcttttgaagacatttacattgaacagcggaaaacaatt
aagacaatgctggaatatgctgataaagtgttcacatacatctttattctggagatgctt
ctgaaatgggtggcctatgggtttgccaaatatttcactaatgcctggtgctggctggac
ttcttgattgttgatgtatctttggttagcttaatagctaatgccttgggctactcagaa
ttaggggctattaagtcccttaggacactaagggcattgagacctctgagggccttgtca
cggtttgaagggatgagggtggttgttaatgcccttataggcgcaattccttccatcatg
aacgtcctgctggtttgtctaattttttggctaattttcagtattatgggagtgaacatg
ttttccggaaaatatggctactgtttaaatgtcactgcagacgaatacttttcagttgac
atagttaataataaaacagactgtttaacacttatagcccaaaatgagtctgcgagatgg
aaaaatgtcaaagtgaactttgacaatgttggctttggttacctgtcattgcttcaagtg
gcgacatttaaagggtggatggacattatgtatgctgcagttgattcacgaaagttagag
gagcaaccaatgtatgaagacaatctgtacatgtatctttactttgttatttttatcatc
tttggatccttcttcacactcaacctctttattggtgtcatcattgataattttaatcaa
cagaaaaagaaattcggaggtcaggatatcttcatgacagaggaacaaaagaaatattat
aatgcaatgaaaaagctaggatcaaaaaaaccacaaaagcctgttccaaggcctcagaac
aaatttcaaggtgcagtcttcgactttgtgtccatgcaaccatttgacatcaccatcatg
gttcttatctgcttaaacatggtaacgatgatgattgaaactgatgaccaaagtgacgaa
aaggagaacaacctgtactggattaatgcagtcttcattgtgctttttactggagaatgt
atactgaagcttgtttctctgaggcattattacttcacaatggggtggaacatatttgat
tttgtggttgtcattctatctattgtaggaatgtttttggctgatctaatagagaaatat
tttgtgtcacccaccctgttcagggtcataagactcgccagaataggtcgcatcctacgt
cttattaaaggagcaaagggaattcgtactttgcttttcgcattgatgatgtctcttccg
gcattattcaatatagggttattgcttttcctcgttatgttcatttatgccatctttgga
atgtccaactttgcttatgtgaagaaagaagctggaattgatgatatgttcaatttcgaa
acctttggcaacagcatgatttgcttatttatgatcacaacttcagctgggtgggatggt
ctcttggcaccaattcttaacagtaaagcaccagactgtgaccctcatgcagaacatccc
gggagttctgtcagaggtgattgtggtaacccctctgttgggattttcttctttgtaagt
tacatcatcatatcatttttagttgtagtcaacatgtacattgctgtcattttggagaat
tttggtgttgctaccgaggaaagtgcagaacctctaggggaggatgactttgagatgttc
tacgaagtgtgggaaaagtttgatccagatgcgacacagtttattcaatatagtaaatta
gctgactttgcggatgcactggatccacctcttcgtataccaaaaccaaactatgttcaa
cttattgcaatggatcttcccatggtaagcggtgacagaattcattgccttgacatcctt
ttcgccttcacaaagcgtgtgttgggtgaaggagatgaaatggataatctcagacaacca
atggaagaaaggttcatggcctccaacccttccaaagcctcttatgaaccaattacatct
acattacgtagaaaacaagaggaacagtctgccgttattatccaacgagctttccgatgt
taccttctgaagaaatccattaaacgtgcttcctttctgtacaatcaagacaagggcaaa
gatggagatagtctaataacacgaaaagacattttgagtgaccgactaaatggaaattcc
accacagataaagtagacatcactccctcaacaacctctcccccatcctatgacagtgtt
accaaaccagacaaagaaaaacacgaaaaagacaaaatagagaaagaagaccgggggaaa
gacatcagggagcgtaaaaagtaa
DBGET
integrated database retrieval system
