Bufo bufo (common toad): 121009492
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Entry
121009492 CDS
T07950
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121009492 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbuf03000
]
121009492 (PHF1)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
121009492 (PHF1)
Transcription factors [BR:
bbuf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121009492 (PHF1)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
121009492 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
ASH2L-like_WH
SGF29_Tudor
DUF4537
Motif
Other DBs
NCBI-GeneID:
121009492
NCBI-ProteinID:
XP_040298578
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All DBs
Position
8:209688977..209707210
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AA seq
544 aa
AA seq
DB search
MEGREPSTRPSRTTPASPRVTPALVKRPRFQTLARFWEGQDVLARWTDGLLYLGIIKKVH
EQVDSAQETCLVRFEDNSQFSVLWKDIFPPAVPGKEQLCCVCNSQACTPDNKLVHCGKCK
HAYHQECHVPGVPCDIDSAGSSWMCRQCVFAVATKRGGALKKGPFARSMLQMKLSLPYQL
KSLEWDPLHLTNKQQCYCYCGGPGEWNMKMLQCCRCLQWFHEACTQCLSKPLLYGDRFYV
FECSVCTRGPENAWRLPLGWVDVSHLVLYHLSICCKKKYFDFEREILSFVNENWESLLLG
ELTDTPRSDRYSHLLHALTAEKERFISGKEIKKKKCLFGLQSRVPPPAPQTTLTELRLQD
TDVRGSTPCVSSLLGRMGVLRSPPHKTKTPSIEKRTRKERQKLQRAVTQDTVQNPFSCNQ
EYLGYCGSPYNFRRTGARCLQSPPIRMFASFHPSANTSGTVAASLQSSEVSPAVSEVPPL
LPEAVDRSIPAPEPSSPPAPPSSSSSEGCEWSESPEEGTRVLARRVTPAGSIEYLVEREE
GEIF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcgggagccctcgaccagacccagccgcaccacacctgccagcccgagggtg
actcctgcactggtgaaacggcctcgctttcagactctggcgcgtttttgggagggtcaa
gatgttttagctcgttggacagatggactcctgtatctaggcatcatcaaaaaggttcac
gagcaggtggacagcgcacaagagacgtgtttggttcgctttgaagataattcccagttc
tccgtgctctggaaggacatcttcccccctgctgtgcccggaaaggagcagctgtgctgt
gtgtgcaactcgcaggcgtgtacccccgacaataagctggtgcattgtgggaagtgtaag
cacgcttatcatcaggaatgtcatgtacccggcgtgccatgcgatatagatagtgcaggg
agctcctggatgtgtagacaatgcgtctttgcggtggctaccaagagaggtggcgcgctc
aagaagggccccttcgctcgctccatgctgcagatgaagctgtctttgccctatcaatta
aagtctttagagtgggacccactgcacctaaccaataaacagcagtgttactgctactgc
ggggggcctggagaatggaacatgaagatgcttcagtgctgtcgctgcctccagtggttt
catgaagcttgtacacagtgtctgagcaaacctcttttatacggagacaggttttatgtt
tttgagtgctcggtctgtacaagaggtccagaaaacgcctggagacttcctctgggatgg
gtggatgtgtcgcacctcgtcctctatcacctcagtatttgttgtaagaagaagtatttc
gattttgaacgggaaatcttgtcttttgtgaatgagaactgggagagtctactactggga
gaacttacagatacccctcgttcggacaggtactcccatctgctccacgccttgacagca
gagaaagaaaggtttatctctgggaaggagattaagaagaagaagtgtctgtttggactc
cagagccgcgtcccccctcccgccccacagacgacactgactgagctgaggctacaggat
acagacgtgagaggctccactccgtgtgtaagttcccttttagggaggatgggggtcctg
agaagccctccacacaaaacaaagacaccaagcatagagaagcggacgcggaaggagagg
cagaagctgcagagagctgttacccaggatacggtacagaatccttttagttgtaaccag
gagtacttgggatactgcggtagcccctacaacttccgacgcactggggcgcgctgcctg
cagagccctccaattaggatgtttgcctctttccacccatcagcaaacacttctgggact
gtggctgcttctcttcagtccagtgaggtgtcccctgcagtctcagaagtgccccctctg
ctcccagaggcggtggaccgatcaatccctgctccagaaccttcctctcctcccgcacct
ccatcctcatcttcctcagagggctgtgagtggtcagagtcaccagaagaggggacgagg
gtgctggcccggagggtcaccccggcggggtcgattgaatatttagtggaaagggaagaa
ggagagatcttctga
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