Buteo buteo (common buzzard): 142027364
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Entry
142027364 CDS
T11399
Symbol
MSH3
Name
(RefSeq) DNA mismatch repair protein Msh3 isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
142027364 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbut03400
]
142027364 (MSH3)
DNA repair and recombination proteins [BR:
bbut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
142027364 (MSH3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
142027364
NCBI-ProteinID:
XP_074877516
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Position
Z:80341814..80460080
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AA seq
1101 aa
AA seq
DB search
MPRGRRRREGGVGGGGQQLVLSRFFGAAGSGGEQGAARQTASELGTKRRTSTESNEPCEK
KTKARQITLEDVCNPLKTQDKKEPQKSEKPRICLQTLDRLREFCSDSDQPCNRVREDSFR
EKESPNLEKCPSIIGRSSQLKNTLPSWDTSPNVAQKEELRCDLSQFSASLKSCENTQNTS
DTNLNKRTKSIYTPLELQFIEMKKQYKDAVLCVECGYKYRFFGEDAEIAAKELNIYCHQD
HNFMTASIPSHRLFVHVRRLVAKGYKVGVIKQMETAALKAAGENKSSLFSRKLTALYTKS
TLIGEDVNPLLKLDDSVDVEEVTTDVPDNYLLCICENGENLKDRKKGDTVIGIMAIQPTT
GEVIFDSFRDCASRLELESRVLRLQPVEIILPSSLSDQSEKLINSITSMRLRDDRIRIER
METLHFEYSHAFQLITDFYAKEVPDTTGPQKLSVILSLDKPVICSLAAVIAYLKEFNLER
MLYNPSNFKRLSSETEYMTINGTTMKNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRRLK
KWVTQPLMKSSEINARLDAVSEILLSESSVFGQIRNLLCKLPDIERGLCSVFHKKCSTQE
FFLIVSTLSRLDLEIQALVPVIHSHVKTPLLQNALLEIPELLSPVKHYLKILNEEAAKTG
DKTQLFKDLTDFPVIRKRKEEILDVLSKIQLHLLDIRKQIKNPSAEYVTVSGQEFMIEVK
NSHKSSVPSDWVMVSSTKAVSRFHSPFIIENYRHLNQLREQLVLDCSAEWLNFLDHFSEH
YHPVSKAIGHLATVDCLFSLAQVAKQGDYCRPTVQDNRQEIIIKNGRHPVIDVLLGEQDQ
YVPNTTNLSGGGERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEESTIGVVDGIF
TRMGAADNIYKGRSTFMEELTDTAEIIRKATSRSLVILDELGRGTSTHDGIAIAYATLEH
FIRDVESLTLFVTHYPSVCELEKVYPEKVGNYHMAFLVNEEESAEQKGSEDEENPEFITF
LYQITKGVSARSYGLNVAKLADIPEEILKKAAHKSKELERIVNMKRKKLKSFAELWKIND
SQELQKWKSMCEHEDERKDSF
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggggcggcggcggcgggaaggcggcgtcggcggcggggggcagcagctggtg
ctgagcaggttcttcggagcggcggggagcggcggggagcagggtgccgcccggcagacg
gcttctgaattgggcacaaaaaggagaacatcaacagaaagcaatgaaccctgtgaaaag
aagaccaaggcacgacagattactctagaagatgtctgtaacccactgaagactcaggat
aaaaaagaacctcagaagagtgaaaagccccgtatatgtttgcaaactctagacagattg
agagaattctgcagtgattcagaccagccatgtaacagagtccgagaggatagttttcgg
gagaaagaatctccgaatttggaaaaatgtcccagtattattgggagaagttcacaactg
aaaaacactcttccgtcttgggacactagcccaaatgttgctcagaaggaggagttacgc
tgtgatcttagtcagttttctgcatctcttaagtcttgtgaaaatactcaaaatacttca
gatacaaatcttaataagagaaccaaaagcatttacactccactagaacttcaattcata
gaaatgaagaaacagtataaagatgctgttttgtgtgtggaatgcggatacaaatatcgc
ttctttggagaagatgcagagattgcagctaaagaactaaacatttattgtcatcaggat
cataactttatgactgccagtataccgagtcacagattgtttgtccatgtgcggcgactt
gtagcaaaaggatataaggttggagtaataaaacaaatggaaactgcagcactgaaggct
gctggagaaaataaaagttctctcttcagccggaaactgactgctctctacacaaagtct
acgcttattggagaagatgtgaaccctttgctgaagctagatgattctgtagatgttgaa
gaggtaacaacagatgtccctgataactacctcctctgtatctgtgaaaatggagaaaac
ttaaaagacaggaagaaaggtgacactgttataggcattatggcaatccaaccaactact
ggagaagtaatttttgacagttttcgggactgtgcatctcgcttagaattagagagtcgg
gttttgcgcctgcagccagttgaaataatacttccatctagcttgtcagatcaatctgaa
aagctcatcaacagtataacctccatgaggttacgggatgacagaattaggatagaaagg
atggaaaccctccattttgaatacagccatgctttccagctgattactgatttttatgca
aaagaagtgcctgatactacaggtcctcaaaaactatctgtaatactaagcttagataag
cctgttatttgctctctggcagcagtaattgcatacctcaaagaatttaatttggagagg
atgctttacaatccaagcaatttcaaacggttgtcaagtgaaactgaatacatgacaatt
aacgggacaacaatgaaaaatctcgaaattttacagaatcagactgatatgaaaacaaaa
ggaagcctactgtgggtcttggatcatactaaaacttcctttggacgtcgaagattgaag
aaatgggtaacgcagcccctcatgaaatccagtgaaataaatgcccggcttgatgctgtg
tctgaaattctactgtcagaatccagtgtgtttggtcagattcgaaatcttctttgcaag
ctgccagatatagagagaggcctctgcagtgtttttcacaaaaagtgctcaacccaagag
ttcttcttaatagtcagcaccctgtctcgtctggacttggaaattcaagctcttgttcca
gtcatacattctcatgtgaaaactcctctattacaaaatgcactgttggaaatcccagaa
cttctctccccagtaaaacattatttaaagatccttaatgaagaagcagccaagactgga
gataaaacccaattgttcaaggaccttacagacttccctgtcatcagaaagagaaaggag
gagatcctggatgtgctttctaaaatccaattgcatctgctggacattcgtaaacaaatt
aagaatccttctgcagagtatgttacagtttctggtcaagagtttatgatagaagtcaag
aattcccataaatcatctgtgccatctgactgggttatggttagtagcacaaaagctgtc
agccgtttccactctccttttattatagaaaattacagacatctgaaccagctccgggag
cagctagtccttgactgcagtgctgaatggctaaattttttagaccattttagtgaacat
tatcaccctgtgtctaaagcgattggtcacctagcaactgtcgactgtctgttctcattg
gctcaggtggctaaacaaggagactactgcagaccaactgtgcaagataatcggcaagaa
ataattataaaaaatgggaggcaccctgtgattgatgtactactgggagaacaggatcag
tatgttcccaataccactaacctttcaggaggtggtgaaagggtcatgataataactgga
cccaacatgggaggaaagagttcctatataaagcaagttgcattgatcacagtcatggca
cagattggttcttacgttcctgcagaggagtcaacaattggtgttgtggatggtattttt
accagaatgggagcggcagacaacatttacaaaggccggagtacctttatggaagaactg
acagatactgctgagataataagaaaagcaacttcaagatcactagtaattttggatgaa
ttgggaagaggaactagcacgcacgatggaatcgctattgcttatgctacacttgaacat
tttattagagatgtggagtcactgacactgtttgtcactcactatccctcagtttgtgag
ctagagaaggtgtatccagaaaaagttggtaactaccacatggctttcttagtgaatgag
gaggaaagtgctgaacaaaaaggatctgaagatgaagagaatcctgaatttatcactttt
ctttatcaaataactaaaggagtttctgcaagaagttatgggctaaatgttgccaaactg
gcagatattcctgaagaaatcttgaagaaggcagctcacaaatcaaaggagttggagaga
atagtgaatatgaaaagaaaaaagctaaagtcgtttgctgaactatggaagataaatgac
tctcaggaactacaaaaatggaaaagtatgtgtgaacatgaagatgaaagaaaggacagt
ttttaa
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