Buteo buteo (common buzzard): 142027481
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Entry
142027481 CDS
T11399
Symbol
RIGI
Name
(RefSeq) antiviral innate immune response receptor RIG-I isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut04622
RIG-I-like receptor signaling pathway
bbut04623
Cytosolic DNA-sensing pathway
bbut05164
Influenza A
bbut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
142027481 (RIGI)
04623 Cytosolic DNA-sensing pathway
142027481 (RIGI)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
142027481 (RIGI)
05168 Herpes simplex virus 1 infection
142027481 (RIGI)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bbut04054
]
142027481 (RIGI)
Enzymes [BR:
bbut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
142027481 (RIGI)
Pattern recognition receptors [BR:
bbut04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
142027481 (RIGI)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_19
AAA_25
Motif
Other DBs
NCBI-GeneID:
142027481
NCBI-ProteinID:
XP_074877847
LinkDB
All DBs
Position
Z:70929083..70957378
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AA seq
1035 aa
AA seq
DB search
MLAFFFYFSSFFFFFSFSFAKGRRQRKAPGCLRRRPGPSFGAAFGFHSLGGLKFLFPVRS
LPGVGGEHPLVPRRLSRCRATVGARGPRTQPGPGPGPQPGQGQGQGPGPAAEKRSLQCYR
RYIEKSLNPVYILGNMTDWLSDEVKERVRKEEEKGVTAAATLFLDTILQLEAEGWLRGFL
DALVAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATMLEVDPVALMPYINMCLIERE
CEEILQVSEYRSKAAGITKLIECLCRSDKENWPKSLQLALDNTGYYNASELWDIREDNGK
DVDGEMTDASENSFETVVTFSEEAECDNNLSENLCSASEGIYQSSRVYKPKKARSYQTEL
AQPAINGKNTLICAPTGSGKTFVAILICEHHFQNMPSGQKAKVVFLATKVPVYEQQKTVF
KQHFERSGYSVQGISGETVANVSVEKVIQDSDIIVLTPQILVNSIEEGILSSLSIFTLMI
FDECHNTTGNHPYNVLMSRYLEQKFDSASQLPQIVGLTASVGVGNAKSTTETIEHICTLC
SYLDIQAISTVRENKQDLQRFANKPETHVRWVKMRDQNHFADIISGLMSETEALMRRIYS
VDTISQINKNDFGTQKYEQWIVATQKKCRLLQLADKEKESSICRHLFICTEHLRKFNDAL
IISEDARIEDALAYLTEFFTNVKNGPYTELEKKLTAKFQEKEPELTALSKDESNENPKLE
ELACILEEAYRYNPDTHTLLFAKTRALVAALKKWIEANPLLSYIKPGVLMGRGRRDQKTG
MTLPMQKGVLDAFKTNKENRLLIATSVADEGIDISECNLVVLYEYFGNVTKMIQVRGRGR
AKDSKCILVTSKTEVVENEKYNRYKEEMMNEAIEKLQSWDETTFARKIHDLQMKEKVLRD
SRKKETRSKVVEGKKNLLCGKCKAYACSTDDIRVIKESHHTVLGDAFKERYITKPHHKPV
RFDWFEKKSKMYCQNTNCQHDWGIIVKYKTFDNLPVIKIKSFVLENVETGTQMDFQKWKN
INFSLKTFDVEETSS
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccttttttttttatttttcttctttttttttttttttttcattttcttttgct
aagggcaggcggcagcggaaagcacccggctgcctccgccggcggcccggcccctctttc
ggggccgctttcggtttccattctctcggaggcctgaagtttctttttcccgtccgctcc
ctgcccggcgtgggcggggagcatcctctcgttccccgccggctctcccggtgccgggcc
acggtgggggctcgggggccccgcacgcagccggggccggggccggggccgcagccgggg
caggggcaggggcaggggccggggccggcggcggagaagaggagcctgcagtgctacagg
cggtacatcgagaagagcctgaaccccgtctacatcctgggcaacatgacggactggctg
tccgacgaggtgaaggagagggtccggaaggaggaggagaagggggtgacggcggccgcc
acgctgttcctggacaccatcctgcagctggaggcggagggctggctgcggggcttcctg
gacgccctggttgcagcagggtacactggactggcagaagcaattgaaaactgggacttc
agcaaactggaaaaactagagttgcacagacagctgttgaagcggatagaagcaacaatg
ctagaagttgatccggtagcactcatgccgtacataaacatgtgcctgatagaaagggag
tgtgaggagatcctgcaggtcagcgaatacagaagcaaagcagccgggataactaaactc
attgaatgtctctgtcgatcagataaggaaaactggccaaaaagccttcagctagcactg
gataacacaggatattacaatgcaagtgaactgtgggatataagagaagataatggcaaa
gatgtggatggtgaaatgacagatgcctctgagaacagctttgaaactgtggtgacgttt
tctgaagaagcagaatgtgataataatctcagtgaaaatctctgttcagcttcagaaggg
atctatcagtcttcacgtgtttataaaccaaagaaggctcggagctaccagactgaactt
gcgcagcctgctatcaatgggaaaaacacattgatatgtgcccctacaggatctggaaaa
acctttgtggcaattctgatttgtgaacaccatttccaaaacatgccctcaggacaaaag
gcgaaagttgtctttcttgcaactaaagtgccagtgtacgaacaacagaaaactgtattc
aagcagcattttgaaagaagtggatattctgttcaaggaattagtggtgaaacagttgca
aatgtctccgtagaaaaggttatacaggacagtgacatcattgtgctaacaccccagatt
cttgtgaatagcattgaggaagggatccttagctccctctccatcttcactctgatgata
tttgatgagtgccacaacactacgggtaatcacccttacaacgtgttaatgagtagatac
ctggaacaaaaatttgactctgcaagccagctgcctcagattgtaggtttaactgcttct
gttggagttggtaatgccaagagcaccacggaaacgatagagcacatctgtaccctctgc
tcctaccttgacatacaggccatatccactgtcagagagaacaaacaggatctgcagaga
tttgcaaacaagccagaaacacatgtcagatgggttaaaatgcgagatcagaatcacttt
gcagacattatctcaggtctgatgtctgagacagaggcattgatgaggaggatttactca
gtggacactatctcccaaatcaacaagaatgattttggaacacagaaatatgaacagtgg
atagttgccactcagaagaaatgcaggctgttgcaactggcagataaggagaaggagagc
agcatttgtagacaccttttcatttgcactgaacacctgcggaaattcaatgatgctctt
atcatcagtgaagatgcccgcattgaagatgctttagcctacctaactgaatttttcaca
aatgtcaaaaatggaccatatacagagttagagaagaaactgacagccaaatttcaagag
aaagaaccagaactgactgccctttcaaaagatgagtcaaatgagaatcctaagctggaa
gagcttgcttgcatcctggaggaagcataccgctataacccagacactcacactcttctc
tttgctaagacaagagccttagtagctgctttgaagaagtggatagaagcaaaccctcta
cttagctacataaagccaggtgtgttgatgggtcgtggaagaagagatcaaaaaacaggt
atgaccctcccaatgcagaagggtgtgctggatgcattcaaaaccaacaaagagaacaga
ctgctaattgctacatccgttgctgatgaaggcattgatatttctgagtgcaaccttgtt
gtgctctatgaatacttcggtaatgtcaccaaaatgatccaagtcagaggtcgtggaagg
gcaaaagacagcaaatgcatccttgtgacaagcaaaacagaagtggttgagaatgagaaa
tacaaccgttacaaggaagaaatgatgaatgaagctattgaaaagctacagagttgggat
gaaacaacatttgcaagaaagatacatgacctgcaaatgaaggaaaaggtattacgagac
tccaggaagaaagaaacaagaagtaaggtagtggaagggaaaaaaaatcttctttgtgga
aaatgcaaagcatatgcctgcagtacagatgacatcagagttataaaggaatctcatcac
actgtcctaggagacgcgttcaaggagcgttatataacaaagcctcaccataaaccagtc
aggtttgattggtttgagaaaaaaagcaagatgtattgccaaaatactaattgccagcat
gactggggaatcatagtgaagtacaagacatttgataatctaccagtgatcaaaatcaaa
agttttgtattagagaatgttgaaactgggacacaaatggattttcagaaatggaagaat
attaatttttctttgaagacttttgatgttgaagaaacatccagctga
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