Buteo buteo (common buzzard): 142035456
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Entry
142035456 CDS
T11399
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut04514
Cell adhesion molecule (CAM) interaction
bbut04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
142035456 (VCAM1)
04518 Integrin signaling
142035456 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbut04515
]
142035456 (VCAM1)
04090 CD molecules [BR:
bbut04090
]
142035456 (VCAM1)
04091 Lectins [BR:
bbut04091
]
142035456 (VCAM1)
Cell adhesion molecules [BR:
bbut04515
]
Immunoglobulin superfamily
VCAM
142035456 (VCAM1)
CD molecules [BR:
bbut04090
]
Proteins
142035456 (VCAM1)
Lectins [BR:
bbut04091
]
I-type lectins (Siglecs)
142035456 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
Ig_VEGFR-1-like_5th
C2-set_2
C2-set
ICAM_N
Ig_6
DUF2808
Ig_C17orf99
C1-set
Syndecan
Ig_4
ICAM1_3_5_D2
Motif
Other DBs
NCBI-GeneID:
142035456
NCBI-ProteinID:
XP_074893651
LinkDB
All DBs
Position
10:complement(15906857..15915274)
Genome browser
AA seq
632 aa
AA seq
DB search
MRRNGKIKVENAAEFMYVLPIVVKAFEMEIIPANRIVAQIGETLILTCNTTGCASPSFSW
RTQMDNPLGGTVNNHRTYSTLTMNPVSIVNSHDYLCTVFCGEKEKKEKSIKVELYSFPSN
PIIEIRPSLVAGEPVTVICKIPDVYPSDHLEVLLKKEGYILHEENFYEDDSTNTETKTVT
YSFNPTAEDIGKEIICVAKLPIAYMDFEPKERVTSQKLNTNFGPKITIITASPGNSPMEG
DPLKLTCVTESNSPTQTVWRKHLADESIQHLIENNVLFIPHTRFTDSGLYICEVINLVTN
KTEKATMDIVIQGSPNITELSIEPSITVREGENVSIQCSAEGNPPPKIILRRKSDSADMG
SYSEGRILLLPSVTFLNGGDYECIAENKFGKSKSEITLNVEYGPKNTMISVIPATAVREG
ETVVMKCTSSGNPAPVISWKKKTATGELEKMFEDATLPIQNVKSQDMGLYECEAYNQFGR
EEKAVKLLVQVPPQNITVLVYPSENVKEGENVTITCSTYSNPPSQMVLKKVHQEKEIILS
SVNGTFILYNVTKNDAGRYLLDVFNEAGNNVKVIEISVVGRLEKTDQMIPLIIAFSCVTA
IAVPVVAILIYVSRKAKINGSYSLVKALRLKV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaatggcaaaataaaagttgagaatgctgctgagtttatgtatgttctccct
attgtagttaaagcatttgaaatggagattatacctgctaacagaattgttgcacagatt
ggagaaacactcatactcacatgcaatactactggctgtgcatcaccaagtttttcctgg
agaacccagatggacaacccccttggaggaacagtgaacaaccataggacatactctacc
ttgactatgaatccagttagcattgtgaattctcatgattatctgtgtactgtcttctgt
ggtgagaaagagaaaaaagagaagagtatcaaagttgaactttactctttccccagcaat
cctatcattgagatcaggccatccttagttgctggagaaccagtcactgtcatctgtaaa
attcctgatgtgtatccttctgatcacctggaagtactcctaaagaaagaggggtatatt
cttcatgaagaaaatttttatgaagatgacagcacaaatacagagacaaaaactgtgact
tattcttttaatcccacggctgaagatattgggaaagagattatctgtgtggccaagtta
ccaattgcttatatggactttgaacctaaagaaagagtaacttctcagaaactgaataca
aactttggccccaaaattactatcattactgcatctccaggcaactcgccaatggaagga
gaccctctaaaactcacttgtgtgactgagagtaattcaccaacacaaacagtttggaga
aaacatttggctgatgaaagcattcagcatctgatagaaaacaatgtcctttttattccc
catacccgtttcactgattcaggactgtacatctgtgaagtaattaatctggtaactaat
aaaacagagaaagcaactatggacattgtcatacaaggttctccaaacattacagaactc
tctattgagccttctataacagttcgagaaggagaaaatgtttccatacagtgttctgct
gagggtaaccctcctcccaagattattttaaggagaaaatctgacagtgcagacatgggg
tcttacagtgagggaagaattctccttcttccatctgtgacattcctaaatggaggagac
tacgaatgtatagcagaaaacaagtttgggaaaagtaaaagtgaaataacacttaatgtg
gaatatggaccaaagaatacaatgatctctgttatccctgctactgctgttagagaagga
gaaactgtggtgatgaagtgtactagttctggtaatccggctccagtgatctcttggaag
aaaaagacagccactggggagctggagaaaatgtttgaagatgccactttacctatacag
aatgtaaaaagtcaagatatggggctttatgaatgtgaagcttataaccaatttggcaga
gaagaaaaagctgtcaaattgcttgttcaagttcctccccaaaatattactgtgttagta
tatccatcagaaaatgtcaaagaaggagaaaatgtcactattacatgtagcacgtacagt
aacccaccatcacagatggtcctgaaaaaagtccatcaggagaaagaaattattctgtca
tcagtgaatggaacctttatactctacaatgtcaccaaaaatgatgcaggcagatatttg
cttgatgttttcaatgaggctggaaacaacgtcaaagtgattgagatatctgttgtagga
agattggaaaaaacagatcaaatgataccactgataattgcattctcctgtgtaacagca
atagcagtacctgtagttgcaattttgatctacgtgtcaagaaaagcaaagataaatgga
tcctacagccttgtaaaagcactcaggctgaaagtgtga
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