Buteo buteo (common buzzard): 142044958
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Entry
142044958 CDS
T11399
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03250
Viral life cycle - HIV-1
bbut04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
142044958 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
142044958 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbut03400
]
142044958 (SAMHD1)
DNA repair and recombination proteins [BR:
bbut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
142044958 (SAMHD1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
Pdc1_Ge1
PDEase_I
HD_assoc_2
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
142044958
NCBI-ProteinID:
XP_074914091
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All DBs
Position
2:62578839..62609866
Genome browser
AA seq
683 aa
AA seq
DB search
MGTGGGCRRRGKRGGAQPALPPPGASRPPAQGGGQRWPLTSPRRRCPSRRAERALRLRGG
GGGGMGSPAAAVAGWGAAPAKRARREGSPEGPRGPTAESDRCDPRLWDTERLCQHLSCCG
VGEPSLLRRFRESGVTGSMLLDLPACALEVTRVCLPAERLKVLACLNKLRQQHVDVMKVF
NDPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSIGVGYLAGCL
VRALKERQPELDITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLTRPDLKWKHETASV
EMFEHLIASNKLEEVMKSYGLVLEEDMNFIKEQIGGPIDETACEKSWPYRGRQKEKSFLY
EIVANKKNGIDVDKWDYFARDCHHLGIQNNFDYKRLLKFTRVCEVKNQKHLCTRDKEVGN
LYDMFHTRNCLHRRAYQHKIGNIIEIMITEAFQKADKFFKIEGSGGKLYQISTAMEDMEA
YTKLTDNIYLEILHSSCPELKEARDILHKIERRELYKFLGETQPETMRQIVKNNSLAESI
ANSKPEKDPPDVELKAEDFIIDVINMDYGMKEQNPIDKVLFYCKADPSKAVKISKEQVSK
LLPMTFAEQVIRVYCKSQDPDTISAAKQYFIQWCIEKDFTKPQDGDVVAPHLTPMKKSWN
NMRDDEHRTAAEPSCKQRLPFDK
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggggacgggcggcggctgccggcggcgggggaagcgcggcggggcccagcccgctctg
ccgccacccggcgcttcccgcccgccggcgcaaggcggggggcagcgctggccgctgacg
tcaccgcggcgccggtgcccctctcgccgagcggagcgggcgctgcgcctgcgcggcggc
ggcggcggcggcatggggagcccggcggcggcggtggcgggctggggcgcggctcccgcc
aagcgggcgcggcgcgagggctcgcctgagggtccccgcggccccacggccgagagcgac
cgctgcgacccgcggctgtgggacacggagcggctctgccagcacctctcgtgctgcggc
gtcggcgagcccagcctgctgcgccgcttccgagagagcggagtcaccgggagcatgctg
ctggacctgccggcctgcgccctcgaggtcactcgcgtctgcctccctgctgagagactg
aaagtgctggcctgcctgaacaaactgagacagcagcatgtggatgtaatgaaggttttt
aacgatccaattcatgggcacattgaaatacatccccttcttgttcgtatcatcgacacg
cctcagtttcagcgtctccgatacattaagcagctgggtggcacttactttgtttttcca
ggagcctctcacaaccgctttgaacactccataggggtgggctacctagcaggatgtctg
gttcgtgcactgaaggagagacaaccagaactggatataacccagcgagatatcctctgt
gtagaaattgctgggctttgtcatgatttgggtcatgggccattttcacacatgtttgat
ggaaggtttattccactcactcgtccagatttgaagtggaagcatgaaactgcttctgtt
gaaatgtttgagcacctgatcgcttccaataaactagaagaagtcatgaagtcctatggt
cttgtcctggaagaggatatgaacttcattaaggaacaaataggagggcctatagatgaa
actgcttgtgagaaatcgtggccctaccgtggtcggcaaaaggagaagagtttcctatat
gagatagtagctaacaaaaaaaatggcattgatgttgacaaatgggattattttgcaagg
gattgccatcacctaggaatccagaataattttgattataagcgattacttaaattcact
cgggtctgtgaagtaaaaaaccagaagcatctctgtacccgtgacaaggaagttggaaat
ttgtatgatatgttccacacacggaattgcctgcaccggcgagcataccagcataagatt
ggcaacatcattgaaataatgattacggaagcctttcaaaaagcagacaagttttttaaa
atagaaggctctggaggaaagctgtaccagatttctacagcaatggaggacatggaagcc
tacactaagctgactgataatatctacctggaaattctgcactcaagttgtccagaactg
aaggaggcacgagacattttgcataaaatagaacgacgtgaattatacaagtttttagga
gagactcaacctgaaacaatgaggcaaattgtaaagaataatagcctggcagaaagcatt
gctaattccaagccagaaaaggatcctccagatgtggaactaaaggctgaagatttcata
attgatgttatcaacatggattatggaatgaaagaacagaatcccattgataaagttctc
ttctattgcaaggctgatccttccaaggcagtcaagatcagtaaagaacaggtttcaaag
cttttacccatgacatttgcggagcaggttatccgggtttattgcaaaagtcaggatcca
gatactatttcagctgcaaaacagtattttattcagtggtgtatagagaaggatttcacc
aaaccacaggatggtgatgtggttgcccctcatctaactccaatgaagaaaagctggaat
aacatgagagatgatgaacacaggacagctgcagaacccagctgcaaacaaaggcttcct
tttgataagtaa
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