Bacillus bombysepticus: CY96_12830
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Entry
CY96_12830 CDS
T03597
Name
(GenBank) helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bby
Bacillus bombysepticus
Pathway
bby03420
Nucleotide excision repair
bby03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CY96_12830
03430 Mismatch repair
CY96_12830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bby03400
]
CY96_12830
Enzymes [BR:
bby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CY96_12830
DNA repair and recombination proteins [BR:
bby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CY96_12830
MMR (mismatch excision repair)
Other MMR factors
CY96_12830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
SLFN-g3_helicase
AAA_30
ResIII
DEAD
nSTAND3
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHX18850
UniProt:
A0A9W3PRB1
LinkDB
All DBs
Position
complement(2513521..2515596)
Genome browser
AA seq
691 aa
AA seq
DB search
MSNIFEDELQKMKDTLHTMDEQLDKLEKTPVYYGEDFKEQILESMRESNRQNLRIGVQEP
YFGRLDFQEDGKEEVMPIYIGKVGVSDMDTMKPIIIDWRAPVASMFYSFTGGEELAFYQS
PDGLVEGDVYLKRNISIRKRELERVVDTYVKGNEDVSHADDFLLYRLGENKDNKLKDIVS
TIQSEQNDIIRAERNLPLLIQGVAGSGKTTIALHRLAFLIYEYREQLEAERMIVFAPNSL
FLDYISSVLPELGVGNISQTTFLDWALRTLDDSVKLKQTEEKLKEAFSINRDEKKIMLGK
LKGTLEFKTFIEERMIQFENELVPTKDFEAWDRAIIPVEDIKKWMQVEYKHYPLQKRRER
LVGRMKRWIEIELKKFGETNEKKLLKKEATKRLNAYMKFWPKMSALSLYSSIVKSKEILE
VLPEELVKETEKSCRKKEVYVEDLPALIYIHHRITGIEIGQKFHHVVIDEAQDFSPFQVY
VLKEITLGNSFTILGDLSQAIYDYQGIEDWNAFKEVFQETGYYELTRSYRSTKEIIEFAN
EIIKNAEIPVGLATPVFRSGEDVKVIHAENQFTEIVKTVKHLQNADVKTIAVIGRTEDEC
RDIYVELTNAGLTVNVIEANQSKYEGGISVVPVYLAKGLEFDAVLLIDVDEEHYKDTKHD
AKLLYVGCTRSLHDLWIFHSGEASPLIKGLK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacatatttgaagatgagttacaaaaaatgaaggatactttacatacgatggat
gagcaattggataagcttgaaaaaaccccggtttattatggagaagattttaaagagcaa
attcttgaaagtatgagggagtctaatagacaaaacttacgtattggtgtgcaagagccg
tactttggaaggttagattttcaggaagatggaaaagaagaagttatgccgatttatatc
ggaaaagtaggggtttcggatatggacacgatgaagccaatcattattgattggcgggcg
cctgtcgcaagtatgttttattcatttaccggtggagaagaattagcattttatcaatca
ccagatggcttagtagaaggtgatgtgtatttaaaacgaaacatttccattcgaaaaaga
gaacttgaacgtgttgttgatacatatgtaaaaggaaatgaagatgtatcgcatgccgat
gattttcttctatatcgattaggtgagaataaagataataagctaaaggatattgtttca
acgattcaatcggaacaaaatgatattattcgagcggaaagaaatttaccattacttatt
caaggggttgcagggagcggaaagacaacaattgctttacatcgccttgcttttttaatt
tatgaatatcgtgaacaactagaagcagaaagaatgatcgtatttgcgccgaatagtctg
tttttagactacatttcgagtgtacttcctgaattaggtgtagggaatattagtcaaaca
acgtttctggattgggcattacgtacgttagatgattcagtgaaactaaagcagacagaa
gaaaaattgaaagaagcattttcaattaatcgtgatgaaaagaagataatgctaggtaaa
ttaaagggtacgttggaatttaagacgtttattgaagagagaatgatccaatttgaaaat
gagttagttccgacaaaagattttgaggcgtgggatagagcgattattccagtagaagat
attaaaaaatggatgcaagttgaatataaacattatcctttacagaaaagaagagaacga
ttagtaggacgaatgaagcgctggattgaaattgaacttaaaaaattcggggaaacaaac
gagaaaaaattacttaaaaaagaagcgactaagagactgaacgcatatatgaagttttgg
ccgaaaatgagtgctctttcactgtatagttcaatagtaaaaagtaaagaaatactcgag
gtattacctgaagaacttgttaaagaaacagaaaagagttgtcgtaaaaaagaagtgtat
gtagaagatttaccagctttaatatacatacatcatcgtataacagggattgaaatcggg
cagaagtttcatcacgttgttattgatgaagcgcaagatttttcgcctttccaagtttat
gtattaaaagaaattacattaggtaattctttcactatattaggtgatttatcgcaagcg
atttatgattaccaaggaattgaagattggaatgcttttaaggaagtattccaagaaacc
ggttattatgaattgacaagaagttatcgttctacaaaagaaattattgaatttgcaaat
gaaataattaaaaatgcagaaatcccagtaggactcgcaacaccagtcttccgcagtgga
gaagatgtgaaagtaattcatgcggaaaatcaatttactgaaattgtgaagacggtaaaa
catttgcaaaatgcagatgtgaaaacaattgcggtaatcggaagaacagaagatgaatgc
cgtgatatatatgtggaattaacaaatgcaggattaacggtaaacgtaattgaagcaaac
caaagtaaatatgaaggtggtatatcagtagtacctgtctatttagcgaaaggtttagaa
tttgatgcggtgcttttaattgatgtggatgaagaacattacaaagacacaaaacatgat
gcaaagttactatatgttggatgtacgagatcacttcatgacctatggattttccatagt
ggggaagcgtcacctttaattaaaggattaaaataa
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