Bacillus cabrialesii: EFK13_05995
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Entry
EFK13_05995 CDS
T08101
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bcab
Bacillus cabrialesii
Brite
KEGG Orthology (KO) [BR:
bcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcab03400
]
EFK13_05995 (addA)
Enzymes [BR:
bcab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFK13_05995 (addA)
DNA repair and recombination proteins [BR:
bcab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EFK13_05995 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UQE80128
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All DBs
Position
1170237..1173941
Genome browser
AA seq
1234 aa
AA seq
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MNIPKPADSTWTDDQWNAIVSTGQDILVAAAAGSGKTAVLVERMIRKITAEENPIDVDRL
LVVTFTNASAAEMKHRIADALEKELVKRPGSLHIRRQLSLLNRASISTLHSFCLQVLKKY
YYLIDLDPGFRIADQTEGELLGDEVLDELFEDEYARGDKAFFELVDRYTTDRHDLDLQFL
VKQVYEYSRSHPNPEAWLESFVHLYDVSEKSAIEELPFYQYVKEDIAMVLNGAKEKLLRA
LELTKAPGGPAPRADNFLDDLAQIDELIQQQDDFYELYKRVPAVSFKRAKAVKGDEFDAA
LLDEATDLRNGAKKLLEKLKTDYFTRSPEQHLKSLADMKPVIETLVQLVISYGKRFEAAK
QEKSIIDFSDLEHYCLSILAAENDKGEREPSEAARFYQEQFHEVLVDEYQDTNLVQESIL
QLVTSGPEETGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTESGEGTGRKIDLNKNFRS
RADILDSTNFLFKQLMGGKIGEVDYDELAELKLGAAYPDNDETETELLLIGSSEETDAGE
EAEELETVQFEAKAIAKEIRKLISSPFKVYDGKTKTHRNIQYRDIVILLRSMPWAPQIME
ELRAQGIPVYANLTSGYFEAVEVAVTLSVLKVIDNPYQDIPLASVLRSPIVGADENELSL
IRLENTKAPYYEAMKDYLAAGDRNDELYQKLQAFYGHLQKWRSFSKNHSVSELIWEVYRD
TKYMDYVGGMPGGKQRQANLRVLYDRARQYEATAFRGLFRFLRFIERMQERGDDLGTARA
LSEQEDVVRLMTIHSSKGLEFPVVFTAGLGRNFNMMDLNKSYLLDKELGFGTKFIHPQLR
ISYPTLPLIAMKKKMRRELLSEELRVLYVALTRAKEKLFLIGSCKDHQKQLAKWQASASQ
TDWLLPEFDRYQAKTYLDFIGPALARHRDMETLAENSAAAHADISGHPARFAVRMIHSYD
LLDDDLEERMEEKSERLEAIRQGEPVPGSFAFDEKAREQLSWTYPHHEVTQIRTKQSVSE
IKRKREYEDEYSGRAPVKPADGSILYRRPAFMMKKGLTAAEKGTAMHTVMQHIPLTHAPT
IEEAERTVQKLYEKELLTEEQKAAIDIEEIVQFFHTEIGGQLIGAKWKEREVPFSLALPA
KEIYPDAQEADEPLLVQGIIDCLYETEDGLYLLDYKSDRIEGKFQHGFEGAAPILKKRYK
TQIQLYTKAVEQIAKTKVKGCALYFFDGGHILTL
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcctaaaccggcagacagcacatggacagatgaccaatggaatgccattgtt
tcaaccggccaggatattcttgtggcagcggcggcgggctccgggaaaaccgctgtgctc
gttgaacgaatgatccggaaaatcaccgcggaagaaaacccgattgatgtagatcggctg
ctcgttgtgacatttacaaacgcctcggcggcagaaatgaaacaccgaatcgcggatgcc
ctggaaaaagaacttgtaaagcgccccggctcgttgcatatcagacgccagctgtctctt
ttaaaccgggccagcatttcgacacttcactccttttgcctgcaagtgctgaaaaaatat
tactacttgatcgatcttgatccgggctttcggattgccgatcagacagaaggcgagctg
cttggggatgaagtgctggatgagctgtttgaagatgaatacgcaaggggcgacaaggcg
ttttttgaacttgttgaccgctatacgacagaccggcacgatttggatctgcaatttctt
gttaaacaggtgtacgagtattcccgatcccatccaaacccggaggcatggctggaaagc
tttgttcatttatacgatgtatccgaaaagagcgccatcgaggagcttccgttttatcaa
tatgtcaaagaggatattgcgatggtgcttaacggagcgaaagaaaagctcctgcgcgcg
cttgagctgacgaaagcgccgggcggccccgcgccgcgcgctgataattttcttgatgat
cttgcgcagattgatgaactgattcagcagcaggacgatttttatgagctttataagcgg
gtgcccgcagtctcttttaagcgcgcgaaggcagtaaaaggggacgagtttgatgctgcg
ttgcttgatgaagcaacggatttgagaaacggtgcaaaaaaactgcttgaaaagctcaaa
actgactatttcacgagaagtcctgagcagcacttgaaaagcttagccgacatgaagcct
gtcattgagacgctcgtgcagcttgtcatcagctacggaaaacggtttgaagcggcgaaa
caggaaaaatcaatcatcgatttttctgatttggagcattactgcttgtccattttggca
gctgaaaatgacaaaggtgaacgcgagccgagtgaggcagcaagattttatcaggagcag
tttcatgaggtgctcgttgatgaatatcaagatacaaacctcgtgcaggaatcgatcctg
cagcttgtcacaagcgggccggaggagactggaaacctgtttatggtaggggatgtcaaa
cagtcgatttatcgattcaggcttgcggagccgctccttttcctttccaaatacaaacgg
tttacagaaagcggagaaggcacaggacggaaaatcgacttgaataaaaatttccgtagc
cgggctgatattttagatagcacaaactttttatttaaacagctgatgggcggcaaaatc
ggtgaggttgattatgacgagctggctgaactgaagctcggtgcggcatatccggacaat
gatgagacggaaacggagctgctgctgatcggcagctcagaagagacggatgcaggtgag
gaagcagaagagctggaaacggtgcagttcgaggcgaaagcgatcgctaaggaaattcgc
aaattgatttcatcgccatttaaggtgtatgacggaaaaacgaaaacacaccgcaatatt
caataccgcgatatcgtgattttgctgcgctccatgccgtgggcgccgcaaatcatggaa
gagctgagagcacagggcataccggtttacgccaatttaacgtcaggctattttgaagcg
gtcgaagttgccgtcacgctctcagtgctgaaggtgatcgataacccttaccaggatata
ccgcttgcctctgttctgcgctcaccgattgtcggagcagatgaaaacgagctgtctttg
atccggcttgaaaatacaaaagcgccttactatgaagcgatgaaagactacttggctgcc
ggcgaccggaacgacgagctttatcaaaagctgcaagcgttctacggacatctgcaaaaa
tggcgctcgttttcaaaaaaccactcagtatctgaactgatttgggaagtgtaccgcgac
acgaagtacatggattatgtcggcgggatgccgggcggaaaacagcgccaggccaatttg
cgcgtcctttacgaccgggcgcgccaatatgaagcgacggcatttcgcggcctgttccgt
tttctgcggtttatcgaacgcatgcaggagcgaggggatgatcttggaacggcgcgagcg
ctcagcgagcaggaggatgttgtccgcttaatgacgattcacagcagcaaagggctcgaa
tttcccgtcgtgtttacggcgggtctcggccgcaatttcaacatgatggacttgaacaaa
tcgtatctgctggacaaggagctcgggtttggcacgaagtttattcatccgcaattgcgc
atcagctatccgacgcttccgctcattgcgatgaagaaaaaaatgcgcagggaactgctg
tcagaggaattgcgtgttctgtatgttgcattaacgagagcaaaagaaaaactgtttctg
attggctcgtgcaaggatcatcagaaacagctcgcgaaatggcaggcatccgcgtcacaa
actgactggcttctgcctgaatttgaccgctatcaggcaaaaacgtatttagatttcatc
gggccggcccttgccagacacagagatatggagactttggctgaaaacagtgcggctgcg
catgctgacatctcgggacacccggctcgttttgccgtccgaatgatccattcctatgat
ttgctggatgatgatctggaagaaagaatggaagaaaaaagcgaacgcttagaagcgatt
cgccaaggtgaaccagttcccggctcgtttgcgtttgatgaaaaagcccgtgagcagctg
agctggacatatccgcatcacgaggtgacgcaaattcgcacaaagcagtcggtgtctgag
atcaagagaaaaagagagtacgaggatgaatacagcggcagggcccccgttaaaccggct
gacggaagcattctgtacaggcgtccggctttcatgatgaaaaaaggcctgacagcggcg
gagaaaggaacggccatgcatacggtgatgcagcatatcccgctgacacatgcgccgacg
atagaagaagcggagcggacggttcaaaagctttatgaaaaagaactgctcactgaagaa
caaaaagccgctattgatatagaagaaatcgttcaattcttccacacggaaatcggcgga
cagctgatcggcgcgaaatggaaggagcgggaagtgccattcagtttggcgcttccggcc
aaggagatctatcctgatgcacaggaggcggatgagccgcttttagtgcagggaatcatt
gactgtctctatgaaactgaggacggtttatatctcttggactataaatcagaccggatt
gagggcaaattccagcacggctttgaaggagcggccccgattttgaaaaaacgatataaa
acgcaaattcagctgtacacgaaggctgttgagcaaattgcaaaaacaaaggtaaaggga
tgtgcgctttatttctttgacggagggcacattctgacattatag
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integrated database retrieval system
