KEGG   Paraburkholderia caribensis: K788_0006617
Entry
K788_0006617      CDS       T04141                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase/endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
bcai  Paraburkholderia caribensis
Pathway
bcai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    K788_0006617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcai03400]
    K788_0006617
Enzymes [BR:bcai01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     K788_0006617
DNA repair and recombination proteins [BR:bcai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     K788_0006617
 Prokaryotic type
     K788_0006617
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH EndIII_4Fe-2S HHH_8 DprA_N DUF4817 HHH_5
Other DBs
NCBI-ProteinID: ALL64550
UniProt: A0A0P0R900
LinkDB
Position
1:complement(1871343..1871987)
AA seq 214 aa
MNATKRRAIYETLQSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRQMFPVANT
PQKVFDLGEEGVADYIKTIGLYRTKAKNVIATCRILLDQYGGEVPDAREALESLPGVGRK
TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVELALEKFTPAEFLQDAHHWLI
LHGRYVCKARRPECWHCVIEPLCEFKPKTPPPDL
NT seq 645 nt   +upstreamnt  +downstreamnt
atgaacgcgaccaaacgacgtgcgatctacgagacgctccagagcctgaacccgcatccg
acgaccgaactggaatactcgacgccgttcgagttgctgatcgccgtgatgttgtcggcg
caagcaacggacgtctcggtgaacaaggcgatgcgccagatgttccccgtcgcgaatacg
ccgcagaaggtgttcgacctcggcgaggaaggcgtcgccgactacatcaagacaatcggc
ctgtatcgcacgaaggcgaagaacgtgatcgcgacgtgccgcatcctgctcgaccagtac
ggcggcgaagtgcccgacgcgcgcgaagcgctggagagcctgccgggcgtcggccgcaag
acggcgaacgtcgtgctgaacacggcgttcggccagccgaccatcgccgtcgatacccac
atctttcgggttgccaaccgaacggggctcgcgcctggcaaggacgtgcgcgccgtcgaa
ctggcgctggaaaaattcacgcccgccgaattcctgcaggacgcgcatcactggctgatt
ctgcacggacgctatgtgtgcaaggcgcgccggccggaatgctggcattgcgtcatcgag
ccgctgtgcgaattcaagccgaagacgccgccgcccgatctgtga

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