Bacillus caldolyticus: CWI35_03900
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Entry
CWI35_03900 CDS
T08314
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bcal
Bacillus caldolyticus
Pathway
bcal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWI35_03900 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcal03019
]
CWI35_03900 (pnp)
03016 Transfer RNA biogenesis [BR:
bcal03016
]
CWI35_03900 (pnp)
Enzymes [BR:
bcal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CWI35_03900 (pnp)
Messenger RNA biogenesis [BR:
bcal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CWI35_03900 (pnp)
Transfer RNA biogenesis [BR:
bcal03016
]
Prokaryotic type
tRNA degradation factors
CWI35_03900 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
S1_2
KorB
Motif
Other DBs
NCBI-ProteinID:
AUI35780
UniProt:
A0A2H5KF77
LinkDB
All DBs
Position
complement(751243..753414)
Genome browser
AA seq
723 aa
AA seq
DB search
MEQEKRVFSIDVAGRPLIVETGELAKQANGAALVRYGDTVVLSTATASREAKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILVSRLIDRPIRPLFAEGFRNEVQVVSMVMSV
DQDCAPEVAALIGSSVALTISDIPFEGPIAGVIVGRVDGQFVINPTVEQMEKSDLHLVVA
GTKDAINMVEAGADEVPEEVILEAIMFGHEEVKRLIAFQEEIAAQVGKEKMEVVLYEPDP
ALEAEIRQLAEADIKRAVQVPEKLARDAAIEDVKAGVIAKYEAEEADEEKLKQVQEILHK
LVKEEVRRLITVEKIRPDGRKVDEIRPLSSAVGVLPRTHGSGLFTRGQTQVLSVCTLGAL
GDVQILDGLDLEESKRFMHHYNFPPFSVGETGPMRGPGRREIGHGALGERALEPVVPSER
EFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKNDDHYTILT
DIQGIEDHLGDMDFKVAGTRKGVTALQMDIKIKGLTREILEEALMQARKGRLEILDHMMQ
TLSEPRKELSKYAPKILIMHINPDKIREVIGPSGKQINKIIDETGVKIDIEQDGTIFISS
VDEAANQKAKQIIEDIVREVEVGQVYLGKVKRIEKFGAFVELFNGKDGLVHISELAEGRV
GKVEDVVSIGDEILVKVTEIDKQGRVNLSRKAVLRDARNIGGELPRESREKRGRRPERHR
MKP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagagaaacgcgtgttttccatcgatgtggccgggcggccgctcatcgtcgaa
accggcgagctggcgaaacaggcgaatggcgcggcgctcgtccgctacggcgatacggtc
gtgttgagcacagccaccgcgtcgcgagaggcgaaaaacgttgactttttcccgcttacc
gtcaactacgaggaacggttgtatgcggttggaaaaattcctggcgggtttattaagcgc
gaaggtcgcccgagcgagaaagccattttggtgagccgtctcatcgaccgaccgattcgc
ccgctgtttgccgaaggattccgcaacgaagtgcaagtcgtctcgatggtcatgagcgtt
gatcaagactgcgcgccggaagtagcggccttaatcggttcgtcggtggcgctgacgatt
tccgacattccgtttgaagggccgatcgccggtgtcatcgtcggccgcgttgacggccag
tttgtcatcaatccgacggtcgagcaaatggaaaaaagcgatctgcatcttgtcgtcgcc
ggcacaaaagatgcgatcaacatggtggaagccggggcggatgaggtgccggaagaagtg
attttggaagcgatcatgttcggccatgaggaagtgaagcggctcatcgccttccaagag
gaaatcgccgcccaagtcggcaaagaaaaaatggaagtcgtcctttacgagccggatcca
gcgctggaggcggaaatccgccagcttgccgaagcggacattaagcgagcggtgcaagtg
ccggagaaactggcgcgcgatgctgccattgaagatgtgaaagctggcgtcatcgccaaa
tatgaggcggaagaagcggatgaggagaagctcaagcaagtacaggaaattttgcataaa
ctcgtaaaagaggaagtgcgccgtttgatcacggtcgagaaaatccgtccggacgggcgc
aaagtcgatgaaatccgtccgctttcatcggcggtcggcgtcctgccgcgcacgcacggc
tccggtttgtttacgcgcgggcagacgcaagtgttgagcgtttgtacgcttggggcgctt
ggtgatgtgcaaattttggacgggcttgaccttgaagaatcgaagcggtttatgcaccat
tacaacttcccgccgttttccgtcggggaaaccgggccgatgcgcgggccggggcgtcgt
gaaatcggacacggggcgcttggcgaacgggcgctcgagccggtcgtgccgtcggagcgc
gaattcccgtatacgatccgcctcgtttccgaagtgctggagtcgaacggctcgacatcg
caggccagcatttgcgccagcacgctggcgatgatggatgctggggtgccgattaaagca
ccggtcgccggcattgccatggggcttgtgaaaaacgacgaccattacacgattttgaca
gacattcaaggcatcgaagaccatcttggcgatatggactttaaagtcgccggcacgaga
aaaggcgtgacggcattgcaaatggacattaaaatcaaaggattgacgcgcgagattttg
gaagaggcgctcatgcaagcgcgcaaagggcggctcgagattttggatcatatgatgcaa
acgctcagcgaaccgcgcaaagagctgtccaaatatgcaccgaaaattttgatcatgcac
atcaacccggacaaaatccgggaggtgatcggaccaagcggcaagcagatcaacaaaatc
atcgacgaaaccggcgtcaaaatcgacatcgaacaagacggcacgattttcatctcgtct
gtggatgaagcggccaaccaaaaagcgaagcaaatcatcgaagacatcgtccgcgaagtc
gaagtcggccaagtgtacttaggcaaagtgaaacggattgaaaaattcggcgccttcgtt
gagttgttcaacggcaaagacgggcttgtccatatttccgagctcgctgaagggcgggtc
ggcaaagtcgaagacgtcgtttcgattggcgatgaaattttagtgaaagtaacggaaatc
gataagcaagggcgcgtcaacctgtcgcgcaaagcggtgttgcgcgatgcccgcaacatt
ggaggggaactgccgcgggaatctagggaaaaacgaggaagacggccggagcgccatcgc
atgaagccttag
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