Brucella canis SVA13: DA85_05950
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Entry
DA85_05950 CDS
T03305
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bcas
Brucella canis SVA13
Pathway
bcas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DA85_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcas03021
]
DA85_05950
03400 DNA repair and recombination proteins [BR:
bcas03400
]
DA85_05950
Enzymes [BR:
bcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DA85_05950
Transcription machinery [BR:
bcas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DA85_05950
DNA repair and recombination proteins [BR:
bcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DA85_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AHZ81481
LinkDB
All DBs
Position
1:complement(1210217..1214350)
Genome browser
AA seq
1377 aa
AA seq
DB search
MAQTHSFNGRKRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPSGGRPDEGLQAVFK
SVFPIQDFSGASMLEFVRYEFDPPKFDVDECRQRDLTYSAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQDVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLF
AARVIPYRGSWLDIEFDSKDIVYARIDRRRKLPATTLLMALGMDGEEILSTFYKTVTYTR
DGDNWRIPYSAERFKGMKIISDLVDADTGEVVLEAGKKLTARAAKQLAEKGLKAIKATED
DLFGSYLAEDVVNYATGEIYLEAGDEIDEKVLKTLIDTGETEINVLDIDHVNIGAYIRNT
LAVDKNESRQEALFDIYRVMRPGEPPTMDSAEAMFHSLFFDSERYDLSAVGRVKMNMRLD
LDAEDTVRVLRKEDILAVVKMLVELRDGRGEIDDIDNLGNRRVRSVGELMENQYRVGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKVVDGKVTNDVVYLSAMEEAKHSIAQANVELDEQGGFVDEFVICRHAGEVMMAPRENV
DLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPIVAR
DSGAAIAARRGGIVDQVDATRIVIRATEELDPSKSGVDIYRLQKFQRSNQSTCINQRPLV
RVGDRIHKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSEKIVSDDVFTSI
HIEEFEVAARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVHPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTYGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYGRLADMIDGKVAAAGPKGFKKGTTITRELMTEYPRSQWW
QFAVEDEKLQGELEALRSQYDDSKKLLEARFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRILPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLG
WACAGMGKKIGELLDVYRKTANIEPLRQTLEHIYPDNDRNEPVRSYDDDAILMLANQVKR
GVSIATPVFDGAVEADINAMLTDAGLATSGQSTLYDGRTGEPFDRQVTMGYIYMLKLHHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELDDTREAEQPALPDAAE
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggctcagacccattctttcaatggtcgcaagcgcgtacgcaaatttttcggcaagatc
cccgaggtcgccgagatgccgaaccttatcgaggttcagaaggcatcttacgaccagttc
cttatggttgaagaaccatccggcgggcgtcctgacgagggtttgcaggcggttttcaag
tctgttttcccgatccaggatttctccggcgcttccatgctcgaattcgttcgctacgaa
ttcgatccaccgaagttcgatgttgatgaatgccgtcagcgcgatctgacttattcggcg
ccgctcaaggtgacgctgcgtcttatcgtgttcgatattgacgaagacaccggtgcgaag
tccatcaaggacatcaaggagcaggacgtgtacatgggcgatatgccgctcatgaccgac
aacggcaccttcatcgtcaacggcaccgagcgcgtgatcgtttcgcagatgcaccgttcg
ccgggcgtcttcttcgatcatgacaagggcaagacccattcttcgggcaagctgctgttt
gctgcgcgcgtcattccttatcgcggttcgtggctcgatatcgagttcgattccaaggac
atcgtctatgcgcgcatcgaccgtcggcgcaagctgccggccacgacgttgttgatggcg
ctcggcatggacggcgaagaaattctgtccacgttctacaagactgtcacctatacccgt
gacggcgacaactggcgcattccgtattccgccgaacgcttcaagggcatgaagatcatc
tccgatctcgttgatgccgatacgggcgaggtcgttctggaagcaggcaagaagctgacc
gcgcgtgcggccaagcagcttgccgaaaagggcctcaaggccatcaaggcgacggaagac
gatctgttcggctcgtatctggcggaagatgtcgtcaattacgcaactggcgagatttat
ctcgaagccggtgacgaaatcgatgaaaaggttctcaagaccctgatcgataccggcgag
acggaaatcaacgttctcgatatcgaccatgtcaatatcggtgcgtatatccgcaacacg
ctggctgtcgacaagaacgagagccgccaggaagcattgttcgacatctaccgcgtcatg
cgtccgggtgaaccgcctactatggattcggctgaggccatgttccattcgctgttcttc
gattccgaacgctacgacctttcggccgttggccgcgtgaagatgaacatgcgtctggac
ctcgacgcggaagacaccgtgcgcgtgctgcgcaaggaagatatcctggccgtggtcaag
atgctggtggaactgcgcgatggtcgcggcgagatcgacgacatcgacaatctcggcaac
cgccgcgtgcgttcggtcggcgagctgatggaaaaccagtatcgcgtcggtctgctccgc
atggagcgcgcgatcaaggaacgtatgtcctcgatcgaaatcgatacggtcatgccgcag
gacctcatcaacgcgaagcctgctgctgctgctgttcgtgaattcttcggttcctcgcag
ctttcgcagttcatggaccagaccaacccgctttcggaaatcacccacaagcgccgcctg
tcggctcttggaccgggcggtttgacccgcgagcgtgctggctttgaagtccgcgacgtg
catccgacccattatggccgtatctgcccgattgaaacgccggaaggcccgaatatcggt
ctgatcaactcgcttgcaacctttgcccgcgtcaacaaatatggcttcatcgaaagcccg
tatcgcaaggttgtcgatggcaaggtgacgaatgatgtcgtttacctgtcggcgatggaa
gaagccaagcactcgatcgcccaggcgaatgtggagcttgacgagcagggcggtttcgtt
gacgagttcgtcatctgccgtcatgccggcgaggtgatgatggcgccgcgtgaaaacgtg
gacctgatggacgtttcgccaaagcagcttgtttcggttgctgcagcgctcattccgttc
ctggaaaacgacgacgccaaccgcgcgctcatgggctcgaacatgcagcgtcaggctgtg
ccgctcgtgcgtgctgaagcgccgtttgtcggcacgggcatggaaccgatcgtggctcgc
gactctggtgcagccattgcagcgcgccgcggcggtatcgtcgatcaggttgatgcaacg
cgtatcgttatccgcgccacggaagagctcgatccgtccaagtcgggcgtcgatatctac
cgtttgcagaagttccagcgttcaaaccagtccacctgcatcaatcagcgtccgctcgtt
cgcgtcggtgatcgcatccataagggtgatattatcgctgatggcccgtccacggatctg
ggcgatctggctcttggccgcaacgtgctcgtcgcgttcatgccgtggaacggctacaac
tacgaagattcgatccttctgtccgagaagatcgtttcggacgacgtgttcacctcgatt
cacatcgaggaatttgaagttgccgcccgtgacaccaagcttggacctgaggaaatcaca
cgcgatattccgaacgtttcggaagaagcgctgaagaatctcgacgaagccggcatcgtt
tatatcggtgcggaagtgcatcctggcgacattcttgtcggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggtgaaaaggcatcc
gacgttcgtgatacctccatgcgcatgccgcccggaacctatggtacggtggtggaagtt
cgtgttttcaatcgccacggcgttgaaaaggacgaacgcgccatggctatcgagcgcgag
gaaatcgagcgtctggccaaagaccgtgacgacgaacaggctattctggaccgcaacgtc
tatggccgtctcgccgacatgatcgatggcaaggttgctgctgccggtccgaagggcttc
aagaagggcacgacgatcacccgcgagctgatgaccgaatatccgcggtcgcagtggtgg
cagtttgccgttgaagatgaaaagctgcagggtgaactggaagcgcttcgcagccagtac
gacgactccaagaagctgctcgaagcacgcttcatggacaaggtcgagaaggtgcagcgc
ggcgatgagatgcctccgggcgtcatgaagatggtcaaggtctttgtcgctgtgaagcgc
aagatccagccgggtgacaagatggctggccgccacggcaacaagggtgtggtttcacgc
attctgccggtggaggacatgccgttcctcgaagacggcacgcatgccgacatcgtgttg
aacccgcttggcgttccgagccgaatgaatgtgggccagattctggaaacccaccttggt
tgggcttgcgccggtatgggcaagaagatcggtgagcttctcgacgtttatcgcaaaacg
gccaatatcgagccgctgcgccagacgctggagcacatctatcccgacaacgaccgcaac
gaaccggtccggtcttacgacgacgacgctatcctcatgctggccaaccaggtgaagcgt
ggcgtgtcgattgcaacgccggtcttcgacggtgcggttgaggccgacatcaatgcgatg
ctgacggatgcaggccttgcgacctcgggtcagtcgacgctttacgatggccgtacgggt
gaaccgttcgaccgtcaggtgaccatgggctacatctacatgttgaagctccatcacctt
gtcgacgacaagatccatgctcgttcgatcggaccttactcgctcgtcacgcagcagcct
ctgggcggcaaggcccagttcggcggccagcgcttcggcgaaatggaggtctgggctctg
gaagcatatggtgcggcctacacgctgcaggaaatgcttaccgtcaagtcggacgacgtt
gcaggccgtaccaaggtctatgaagcaatcgttcgcggcgacgacacgttcgaggcgggc
attccggagagcttcaacgttctcgtcaaggaaatgcgttcgctcggcctcaatgtcgag
ctggacgatacccgcgaggcagagcagccggcccttccggacgcggcagaataa
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integrated database retrieval system
