Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043: BBCT_0566
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Entry
BBCT_0566 CDS
T03931
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bcat
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
Pathway
bcat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBCT_0566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcat03400
]
BBCT_0566
Enzymes [BR:
bcat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BBCT_0566
DNA repair and recombination proteins [BR:
bcat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBCT_0566
Prokaryotic type
BBCT_0566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAR01534
UniProt:
A0ABM7EUG7
LinkDB
All DBs
Position
complement(690797..691615)
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AA seq
272 aa
AA seq
DB search
MQSNRIPTLFHTPVKPSRENQTTSIVRTATRRTVRFMTQAHIKPLKDLVEPGWANALAEV
EPQVHHMGDFLRGEIAAGRRYLPASANILRAFTIPFDSIKVLIVGQDPYPTPGHPVGLSF
CVAPEVKPIPRSLTNIYKELTDDLGIPMPANGDLTPWTSQGVMLLNRCLTVEAGKPGSHQ
DKGWEIVTDAAIRALNNRRNPDGSAKPLVAILWGRKAQTLEPLLTNAFIISSPHPSPMSA
RYGFFGSKPFSRANQALIAAGEKPVNWSLPSA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgaaccgcattcccaccctattccacacgcccgtgaaaccatcccgcgaaaac
cagaccacgtcaatcgtcaggaccgcaacacgtcgtacagtaaggttcatgacacaagcg
cacatcaaaccattgaaagacctcgtggagcccggatgggcgaacgccctcgccgaagtc
gaaccacaggtgcaccacatgggcgattttctccgaggggagatcgcagccggacgccga
taccttccggccagcgcgaatattctacgcgcgttcaccattccgttcgacagcatcaaa
gtgcttatcgtgggacaggacccttaccccacccccgggcacccggtgggactgagcttc
tgcgtggcaccggaagtcaagccgatacctcgcagcctgaccaacatatacaaggaactg
acggatgatctcggtatccccatgcccgcgaacggcgatctgacgccttggacgagccag
ggcgtcatgctgctgaacaggtgtctgaccgtcgaagcaggcaagcccggcagccaccaa
gacaaaggatgggagatcgtcactgacgctgcgatcagggcgctcaacaaccgccgcaat
cccgacggcagcgccaagcctttggtcgctattctgtggggacgcaaggcgcaaacgttg
gagccgctgctcaccaatgcgttcatcatctcgtcgccccacccaagccccatgtcagca
cgatatggattcttcggatccaagccgttctcacgcgccaatcaagcgctcatcgccgcg
ggtgaaaagcctgtgaattggtcccttccgtcagcttaa
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