KEGG   Buchnera aphidicola BCc: BCc_226
Entry
BCc_226           CDS       T00423                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
bcc  Buchnera aphidicola BCc
Pathway
bcc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BCc_226 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcc03019]
    BCc_226 (deaD)
   03009 Ribosome biogenesis [BR:bcc03009]
    BCc_226 (deaD)
Enzymes [BR:bcc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     BCc_226 (deaD)
Messenger RNA biogenesis [BR:bcc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BCc_226 (deaD)
Ribosome biogenesis [BR:bcc03009]
 Prokaryotic type
  rRNA helicases
   BCc_226 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII
Other DBs
NCBI-ProteinID: ABJ90695
UniProt: Q057K4
LinkDB
Position
complement(260602..262332)
AA seq 576 aa
MTQIHLSFSVFGLNSFLLKSLKILGYEKPSPIQSACIPYLLSGKDVLGMAQTGSGKTAAF
ALPLLNNINISLKFPQILVLVPTRELAVQVAKSFSDFSKYLIGTQVLALYGGQRYEIQLH
ALRRGPQIIVGTPGRLLDHLKRGTLSLIHLSSLVLDEADEMLRMGFIEDVETIMSKIPRK
HQTALFSATMPNIIRRISRRFMNTPKEIKIQSTGITRPDIQQSYWIVRGRKTDALIRFLE
VEDFSATIIFVRTKNATLEVSEALEKNGYNSAALNGDMNQVLREQTLERLKNGKLDILIA
TDVAARGLDVDRISFVINYDIPTDAESYVHRIGRTGRAGRTGRALLFVEYREYRLLKNIE
RIIKHPIHEIQLPKSEILIEKRLQNISNKIQEQLNNKNLKLYKSLLSKLKLKDGWNFENL
SAALLKLVQNERPLIIPPDKKSSPLSFKRNSFISFNNQKKYTNNRRFLNNKSNKNYKKME
DMILYRIDIGRNDRVEVRHIVGAIANEGDISSRLIGNIRLFSNYSTIELPKSYSKHLFTR
LLHTRILNKPINIKLMSSVVQIKENKRRKFIKSKRI
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgacacaaattcatctctcattttctgtttttggattaaattcttttttattaaaatct
cttaaaatattaggttatgaaaaaccttctcctattcaatctgcttgtattccttattta
ttatcaggaaaagatgttttaggaatggctcaaacaggtagtggaaaaactgcagctttt
gctttacctttattaaataatattaatatttctttaaaatttccacaaattttagtatta
gttcctacacgtgaattagctgtacaagtagctaaatcattttctgatttttctaaatat
ttaataggaacacaagtattagctttatatggtggtcaaagatatgaaatacagttacat
gcattacgaagaggtcctcaaattattgtaggaacaccaggtagattattagatcattta
aaaagaggaactttaagtttaattcatctttctagtcttgttttagatgaagctgatgaa
atgttacgtatgggttttatagaagatgttgaaactataatgtcaaaaatacctcgaaaa
catcagacagcattattttcagctactatgcctaatattattcgtagaatatctagaaga
tttatgaatactccaaaagaaataaaaatacaatctactggtattactcgtcccgacatt
caacaaagttattggattgtaagaggaagaaaaactgatgctttaattcgatttttagaa
gtagaagatttttctgctactataatttttgttcgtacaaaaaatgctactttagaagta
tcagaagcattagaaaaaaacggatacaatagtgctgctttaaatggtgatatgaatcaa
gtattacgagaacaaactttagaacgtttaaaaaatggtaaattagatattttaatagct
actgatgttgcagctagaggtttagatgttgatagaattagttttgttattaattatgat
attcctactgatgcagaatcatatgtgcatagaatcggtagaactggtagagctggtaga
actggtcgtgcattgttatttgttgaatatagagaatatagattattaaaaaatattgaa
agaatcattaaacatcctattcatgaaattcaattacctaaatctgaaattctaatagaa
aaaagattacaaaatatttcaaataaaattcaggaacaattaaataataaaaatttaaaa
ttatataaatcattattatcaaaattaaaattaaaagatggttggaattttgaaaattta
tctgcagcattattaaaattagttcaaaatgaaagaccccttattattccacctgataaa
aaatcttctcctctttcttttaaaagaaattcttttatttcgtttaataatcaaaaaaaa
tatacaaataatagaagatttttaaacaataaatctaataaaaattataaaaagatggaa
gatatgattttatatcgtattgatataggtcgtaatgatagagtagaagttcgtcatatt
gtaggagctatagcaaatgaaggtgatattagcagtagattaattggaaatattagactt
ttttctaattattccactattgaattaccaaaaagttattcaaaacatttatttacacgt
ttattacatacacgtattttaaataaaccaataaatataaaattaatgtcatctgttgtt
caaataaaagaaaataaaagaagaaaatttataaaaagtaaaagaatataa

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