Burkholderia cepacia ATCC 25416: APZ15_05465
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Entry
APZ15_05465 CDS
T04772
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APZ15_05465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcep03021
]
APZ15_05465
03400 DNA repair and recombination proteins [BR:
bcep03400
]
APZ15_05465
Enzymes [BR:
bcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APZ15_05465
Transcription machinery [BR:
bcep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
APZ15_05465
DNA repair and recombination proteins [BR:
bcep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
APZ15_05465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
WHD_CHMP7
Motif
Other DBs
NCBI-ProteinID:
ALK17291
LinkDB
All DBs
Position
1:1198132..1199109
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGENHARVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPNHVIAHLSKGGKLDVQIKIEKGRGYVPGNVRRYGEDTAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETSGVITPEEAIRQSARILVDQLSVFAALEGTETAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgctgaaacccaagatcatcgccgtggaatcgctgggcgagaaccac
gcgagggtggtcatggaaccgttcgaacgcggttacggccataccttgggcaatgcgctt
cgccgcgtgctgctgtcgtcgatggttggctacgcgccgaccgaagtgacgatcgcgggc
gtggtgcacgagtactcgacgctggatggcgtgcaggaagacgtcgtcaacctgctgctg
aacctgaagggcgtggtgttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggtgaaggcgttgtcacggccggcgatatcgagctggctcacgactgcgaagtc
atcaacccgaatcacgtgattgcgcacctgtcgaagggtggcaagctcgacgttcagatc
aagatcgaaaagggtcgtggctatgtgcccggcaacgtccgtcgctacggcgaagacacg
gccaagatcatcggccgcatcgtcctcgacgcatcgttctcgccggttcgccgcgtgagc
tatgcggtcgaaagcgcacgtgtcgagcagcgtaccgacctcgacaagctcgtgatgaac
atcgaaacgagcggtgtgatcacgccggaagaagcgatccgtcaatcggcccgcatcctg
gtcgaccagctgtccgtgttcgcggcgctggaaggcacggaaacggcagccgaagcgccg
tcgcgtgcaccgcagatcgatccgatcctgctgcgtccggtggacgatctcgagctgacg
gttcgttcggcgaactgcctgaaggccgagaacatctactacatcggcgatctcatccag
cgcacggaaaacgagctgctgaagacgccgaacctcggtcgcaagtcgctcaacgagatc
aaggaagtgctcgcttcgcgcggtctcacgctgggcatgaagctcgaaaactggccgccg
gctggtctcgacaagtaa
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