KEGG   Bacillus cereus FRI-35: BCK_16680
Entry
BCK_16680         CDS       T02291                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
bcer  Bacillus cereus FRI-35
Pathway
bcer02024  Quorum sensing
bcer03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcer00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BCK_16680 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BCK_16680 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcer03019]
    BCK_16680 (hfq)
   03036 Chromosome and associated proteins [BR:bcer03036]
    BCK_16680 (hfq)
Messenger RNA biogenesis [BR:bcer03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BCK_16680 (hfq)
Chromosome and associated proteins [BR:bcer03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BCK_16680 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: AFQ11234
LinkDB
Position
3279501..3279725
AA seq 74 aa
MKQSINIQDQFLNQLRKENTFVTLYLLNGFQLRGLIKGFDNFTVLLETEGKQQLIYKHAI
STFVPQKNVSIELE
NT seq 225 nt   +upstreamnt  +downstreamnt
atgaagcaatcaatcaatattcaagatcagtttttaaatcaactccgtaaagagaatacg
tttgttacgctgtacttattaaatggtttccagcttcgtggattaattaaaggatttgat
aattttacagtcctactggaaacagaaggtaagcaacagcttatttataaacatgcaatt
tctacgtttgtaccacaaaaaaatgtttcaattgaattagaatag

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