Bifidobacterium choerinum: BcFMB_03350
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Entry
BcFMB_03350 CDS
T05748
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho00190
Oxidative phosphorylation
bcho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
BcFMB_03350
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BcFMB_03350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcho03019
]
BcFMB_03350
Enzymes [BR:
bcho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
BcFMB_03350
Messenger RNA biogenesis [BR:
bcho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BcFMB_03350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
GDH_ACT1
Motif
Other DBs
NCBI-ProteinID:
ATU20127
UniProt:
A0A087AHB0
LinkDB
All DBs
Position
complement(882693..884930)
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AA seq
745 aa
AA seq
DB search
MAQIFDAPSKAILRSQIAEHIAETDKTDKRETLSGEQPLPPDRFFDRELSWLKFNKRVLE
LAQDEDIPIIERATFAAIFANNLDEFFMVRVAGLKRRIDTGIAVTSPSGLSPRQQMRAIS
EQAHKLQDEHAHYVVDHILPDLAKENIKLLGWDKLTISEQERLSRYFRQQVFPVLTPLAV
DPAHPFPYISGNSLNLAIIVENPASGKSHFARVKIPDNINRLVPVDDMTEDDSDEVRYGF
ITMENLIIAHLETLFPGMIIKEARSFRVTRNEDIEVEEDDAENLLNAIEKELLRRRFGPP
IRLEISDETSPFLSQLLADQMGVTPEEVYRLPAPLDATVLFELGGIDRPDLKFRPFVPTT
NRQIAQVESSRAQDIFAAIREGDILLHHPYDSFSTSVQAFLAQAAADPKVLAIKQTLYRT
SSNSPIIDALIDAAHAGKQVLALVELKARFDEDANIAWARKLERAGVHVVYGIVGLKTHC
KLSLVVRQEADGLKRYCHVGTGNYNPKTARQYTDLGLLTCDPVVGQDMTRLFNQLSGYAP
KSSFHRLLVAPRTVRSGLIQRIRREEDAARAGKEAWIKIKVNSIVDEKTIDALYRASQAG
VKIDIVERGICSLKPGVPGLSENIRVRSILGRFLEHSRIYAFANSDGPQIGEGPISGPEV
WIGSADLMHRNLDRRVEALVRITVPEQIDELIKYIDLQMADSTSSWHMQPDGTYVRHSKD
ADGRPLVDSQEYLIRKHQRRPSAHN
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatttttgacgcaccttcgaaggcgattctgcgcagccagatcgccgaacat
atcgcagagacggacaagaccgacaaacgcgagacgctcagcggcgagcaaccgttgccg
ccggaccgcttcttcgaccgcgagctcagctggctcaagttcaacaagcgcgtgctcgag
ctcgcccaggacgaggacatcccgatcatcgagcgcgcgaccttcgcggcgattttcgcg
aacaacctcgacgagttcttcatggtccgcgtcgccggcctcaagcgccgcatcgacacc
ggcatcgccgtgacgagcccctccggactgagcccgcgccagcagatgcgcgcgatctcc
gagcaggcgcacaagctgcaggacgagcacgcccactacgtcgtggaccacatcctgcct
gacctggcgaaggagaacatcaagctgctgggctgggacaagctcacgatcagcgagcag
gagcgcctgtcgcgctacttccgccagcaggtcttcccggtgctcacgccgctcgccgtc
gacccggcgcacccgttcccgtacatctccggcaactcgctcaatctggcgatcatcgtc
gagaacccggcctccggcaagtcgcacttcgcgcgcgtcaagattccggacaacatcaac
cggctcgtcccggtcgacgacatgaccgaggacgattccgatgaggtgcgctacggcttc
atcacgatggagaacctgatcatcgcgcatctcgagacgctgttcccgggcatgatcatc
aaggaggcgcgttcgttccgcgtgacgcgcaacgaggacatcgaagtcgaggaggacgac
gccgagaacctgctcaacgcgatcgagaaggaactgctgcgccgtcgtttcggaccgccg
atccgcctcgagatctccgacgagacctccccgttcctctcgcagctgctcgccgaccag
atgggcgtcacgccggaggaggtgtaccgcctgcccgcgccgctcgacgcgacggtgctc
ttcgagctcggcggcatcgaccgtccggacctgaagttccgccccttcgtgccgacgacg
aaccgccagatcgcgcaggtcgaatcgagccgcgcgcaggacatcttcgccgcgatccgc
gaaggcgacatcctgctgcaccacccgtacgattcgttctcgacgtcggtgcaggccttc
ctcgcgcaggccgccgccgatccgaaggtcctcgcgatcaagcagacgctgtaccgcacg
tcgagcaactcgccgatcatcgacgcgctcatcgacgccgcgcatgccggcaagcaggtg
ctcgcgctcgtcgagctcaaggcgcgcttcgacgaggacgcgaacatcgcatgggcgcgc
aagctcgaacgcgccggcgtgcacgtcgtctacggcatcgtcggattgaagacgcactgc
aagctgtcgctcgtcgtgcgtcaggaggcggacggcctcaagcgctactgccatgtgggc
accggcaactacaacccgaagacggcgcgccagtacaccgacctcggcctgctcacctgc
gacccggtcgtcggccaggacatgacgcgtctgttcaaccagctgagcggctacgcgccg
aagtcaagcttccaccgtctgctcgtcgcgccgcgcaccgtacgctccggcctcatccag
cgcatccgccgcgaggaggacgctgcacgcgcaggcaaggaggcgtggatcaagatcaag
gtgaactcgatcgtcgacgagaagacgatcgacgcgctctaccgcgccagccaggcgggc
gtgaagatcgacatcgtcgaacgcggcatctgctcgctcaagccgggcgtgcccggactg
agcgagaacatccgtgtgcgttcgatcctcggccgcttcctcgagcacagccgcatctac
gcgttcgcgaactccgacgggccgcagatcggcgaaggcccgatctccggcccggaggtg
tggatcggctccgccgacctgatgcaccgcaacctcgaccgccgcgtcgaggcgctcgtg
cgcatcaccgtgcccgagcagatcgacgaactcatcaagtacatcgatctgcagatggcc
gattcgacgtcaagctggcacatgcagcccgacggcacctacgtgcgccactcgaaggac
gccgacggccgtccgctcgtcgacagccaggaatacctgatccgcaagcatcagcgtcgc
ccaagcgcgcacaactga
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